]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
6 years agoFix boost for MSVC as in https://github.com/boostorg/graph/pull/84 7520/head
Daniel Arndt [Mon, 10 Dec 2018 21:21:13 +0000 (22:21 +0100)]
Fix boost for MSVC as in https://github.com/boostorg/graph/pull/84

6 years agoAvoid linker errors in step-16 for MSVC
Daniel Arndt [Mon, 10 Dec 2018 22:39:16 +0000 (23:39 +0100)]
Avoid linker errors in step-16 for MSVC

6 years agoAvoid MSVC ICE
Daniel Arndt [Mon, 10 Dec 2018 22:38:54 +0000 (23:38 +0100)]
Avoid MSVC ICE

6 years agoAvoid MSVC warnings
Daniel Arndt [Mon, 10 Dec 2018 22:38:12 +0000 (23:38 +0100)]
Avoid MSVC warnings

6 years agoMerge pull request #7517 from masterleinad/no_bundled_float_conversion
David Wells [Mon, 10 Dec 2018 01:47:46 +0000 (20:47 -0500)]
Merge pull request #7517 from masterleinad/no_bundled_float_conversion

Don't use float-conversion in bundled `UMFPACK`

6 years agoMerge pull request #7518 from masterleinad/fix_scalapack
Daniel Arndt [Sun, 9 Dec 2018 21:28:20 +0000 (22:28 +0100)]
Merge pull request #7518 from masterleinad/fix_scalapack

Fix failing SCALAPCK tests

6 years agoChange structure of two Asserts 7518/head
Daniel Arndt [Sun, 9 Dec 2018 19:10:39 +0000 (20:10 +0100)]
Change structure of two Asserts

6 years agoFix failing SCALAPCK tests
Daniel Arndt [Sun, 9 Dec 2018 17:22:06 +0000 (18:22 +0100)]
Fix failing SCALAPCK tests

6 years agoDon't use float-conversion in bundled packages 7517/head
Daniel Arndt [Sun, 9 Dec 2018 02:05:33 +0000 (03:05 +0100)]
Don't use float-conversion in bundled packages

6 years agoMerge pull request #7489 from masterleinad/hp_cell_weights_alternative
David Wells [Sat, 8 Dec 2018 19:35:49 +0000 (14:35 -0500)]
Merge pull request #7489 from masterleinad/hp_cell_weights_alternative

Provide alternative output for mpi/hp_cell_weights_03

6 years agoMerge pull request #7491 from masterleinad/avoid_c_style_cast_8
David Wells [Sat, 8 Dec 2018 19:29:57 +0000 (14:29 -0500)]
Merge pull request #7491 from masterleinad/avoid_c_style_cast_8

Avoid C-style cast in lac (excluding Trilinos)

6 years agoMerge pull request #7510 from masterleinad/fix_conversion_warnings
David Wells [Sat, 8 Dec 2018 19:29:16 +0000 (14:29 -0500)]
Merge pull request #7510 from masterleinad/fix_conversion_warnings

Fix warnings due to conversion from floats to integers in tests

6 years agoMerge pull request #7502 from davydden/feature/lapack_transpose
David Wells [Sat, 8 Dec 2018 19:12:36 +0000 (14:12 -0500)]
Merge pull request #7502 from davydden/feature/lapack_transpose

add LAPACKFullMatrix::transpose()

6 years agoMerge pull request #7492 from drwells/macro-cleanup
Wolfgang Bangerth [Fri, 7 Dec 2018 21:19:48 +0000 (14:19 -0700)]
Merge pull request #7492 from drwells/macro-cleanup

Add a header that undefines macros.

6 years agoMerge pull request #7514 from masterleinad/fix_icc_19_tests
Wolfgang Bangerth [Fri, 7 Dec 2018 21:16:11 +0000 (14:16 -0700)]
Merge pull request #7514 from masterleinad/fix_icc_19_tests

Fix a few tests failing for ICC-19

6 years agoFix a few tests failing for ICC-19 7514/head
Daniel Arndt [Fri, 7 Dec 2018 17:41:25 +0000 (18:41 +0100)]
Fix a few tests failing for ICC-19

6 years agoAdd a header that undefines macros. 7492/head
David Wells [Fri, 30 Nov 2018 19:52:34 +0000 (14:52 -0500)]
Add a header that undefines macros.

Some other projects, notably gtest, also define a macro named
Assert. This new header allows for one to use gtest with deal.II by
undefining all deal.II macros.

6 years agoRestrict Wfloat-conversion to clang 7510/head
Daniel Arndt [Fri, 7 Dec 2018 09:15:36 +0000 (10:15 +0100)]
Restrict Wfloat-conversion to clang

6 years agoMerge pull request #7511 from masterleinad/fix_default_parameter_facap
Daniel Arndt [Fri, 7 Dec 2018 08:11:41 +0000 (09:11 +0100)]
Merge pull request #7511 from masterleinad/fix_default_parameter_facap

Replace default function parameter in find_active_cell_around_point

6 years agoReplace casts in parpack_solver.h 7491/head
Daniel Arndt [Sun, 2 Dec 2018 23:34:51 +0000 (00:34 +0100)]
Replace casts in parpack_solver.h

6 years agoAvoid C-style cast in lac (excluding Trilinos)
Daniel Arndt [Fri, 30 Nov 2018 15:47:17 +0000 (16:47 +0100)]
Avoid C-style cast in lac (excluding Trilinos)

6 years agoReplace default function parameter in find_active_cell_around_point 7511/head
Daniel Arndt [Fri, 7 Dec 2018 00:18:57 +0000 (01:18 +0100)]
Replace default function parameter in find_active_cell_around_point

6 years agoFix warnings due to conversion from floats to integers in tests
Daniel Arndt [Fri, 7 Dec 2018 00:14:02 +0000 (01:14 +0100)]
Fix warnings due to conversion from floats to integers in tests

6 years agomove new blas extension template functions into a separate header 7502/head
Denis Davydov [Thu, 6 Dec 2018 21:43:09 +0000 (22:43 +0100)]
move new blas extension template functions into a separate header

6 years agoMerge pull request #7506 from masterleinad/libc++_dof_renumbering
Bruno Turcksin [Thu, 6 Dec 2018 15:33:25 +0000 (10:33 -0500)]
Merge pull request #7506 from masterleinad/libc++_dof_renumbering

Provide alternative output files for dof_renumbering_0(4|5) and libc++

6 years agoMerge pull request #7499 from masterleinad/fix_wfloat_conversion
Bruno Turcksin [Thu, 6 Dec 2018 15:31:26 +0000 (10:31 -0500)]
Merge pull request #7499 from masterleinad/fix_wfloat_conversion

Fix all Wfloat-conversion warnings

6 years agoMerge pull request #7505 from luca-heltai/rtree-to-find-active-cell-around-point
Daniel Arndt [Thu, 6 Dec 2018 14:30:21 +0000 (15:30 +0100)]
Merge pull request #7505 from luca-heltai/rtree-to-find-active-cell-around-point

find_active_cell_around_point now takes also an rtree of vertices.

6 years agoFind active cell around point now takes also an rtree of vertices. 7505/head
Luca Heltai [Wed, 5 Dec 2018 12:52:50 +0000 (13:52 +0100)]
Find active cell around point now takes also an rtree of vertices.

6 years agoMerge pull request #7504 from masterleinad/fix_warnings_bundled_boost
Daniel Arndt [Wed, 5 Dec 2018 21:19:12 +0000 (22:19 +0100)]
Merge pull request #7504 from masterleinad/fix_warnings_bundled_boost

Fix a few warnings from the bundled boost package

6 years agoMerge pull request #7503 from marcfehling/fe-series-calculate
Daniel Arndt [Wed, 5 Dec 2018 21:18:07 +0000 (22:18 +0100)]
Merge pull request #7503 from marcfehling/fe-series-calculate

FESeries::calculate accepts different VectorType for local dof values.

6 years agomake LAPACKFullMatrix::transpose() do conjugate transpose for complex data types
Denis Davydov [Wed, 5 Dec 2018 21:12:30 +0000 (22:12 +0100)]
make LAPACKFullMatrix::transpose() do conjugate transpose for complex data types

6 years agoAdd LAPACKFullMatrix::transpose() to perform out-of-place transposition.
Denis Davydov [Wed, 5 Dec 2018 17:46:01 +0000 (18:46 +0100)]
Add LAPACKFullMatrix::transpose() to perform out-of-place transposition.

6 years agoAdd DEAL_II_LAPACK_WITH_MKL macro which will be set if Intel MKL is being used
Denis Davydov [Wed, 5 Dec 2018 17:33:07 +0000 (18:33 +0100)]
Add DEAL_II_LAPACK_WITH_MKL macro which will be set if Intel MKL is being used

6 years agoProvide alternative output files for dof_renumbering_0(4|5) adn libc++ 7506/head
Daniel Arndt [Wed, 5 Dec 2018 14:13:04 +0000 (15:13 +0100)]
Provide alternative output files for dof_renumbering_0(4|5) adn libc++

6 years agoFESeries::calculate accepts different VectorType for local dof values. Minor cleanups. 7503/head
Marc Fehling [Tue, 4 Dec 2018 22:18:31 +0000 (23:18 +0100)]
FESeries::calculate accepts different VectorType for local dof values. Minor cleanups.

6 years agoFix a few warnings from the bundled boost package 7504/head
Daniel Arndt [Wed, 5 Dec 2018 10:12:14 +0000 (11:12 +0100)]
Fix a few warnings from the bundled boost package

6 years agoMerge pull request #7498 from luca-heltai/rtree-to-cache
Daniel Arndt [Tue, 4 Dec 2018 21:20:44 +0000 (22:20 +0100)]
Merge pull request #7498 from luca-heltai/rtree-to-cache

Rtree to cache

6 years agoFixed comments. 7498/head
Luca Heltai [Tue, 4 Dec 2018 15:47:18 +0000 (16:47 +0100)]
Fixed comments.

6 years agoUse double for istream again 7499/head
Daniel Arndt [Tue, 4 Dec 2018 00:21:07 +0000 (01:21 +0100)]
Use double for istream again

6 years agoFix muparse and change a unsigned type
Daniel Arndt [Mon, 3 Dec 2018 20:48:00 +0000 (21:48 +0100)]
Fix muparse and change a unsigned type

6 years agoFix all Wfloat-conversion warnings
Daniel Arndt [Mon, 3 Dec 2018 17:34:04 +0000 (18:34 +0100)]
Fix all Wfloat-conversion warnings

6 years agoChangelog.
Luca Heltai [Mon, 3 Dec 2018 13:21:46 +0000 (14:21 +0100)]
Changelog.

6 years agoAdded BoundingBox tree to Cache.
Luca Heltai [Mon, 3 Dec 2018 13:21:40 +0000 (14:21 +0100)]
Added BoundingBox tree to Cache.

6 years agoAdded rtree of vertices to Cache.
Luca Heltai [Mon, 3 Dec 2018 13:14:43 +0000 (14:14 +0100)]
Added rtree of vertices to Cache.

6 years agoMerge pull request #7497 from masterleinad/top_level_inclusion
Denis Davydov [Mon, 3 Dec 2018 10:19:51 +0000 (11:19 +0100)]
Merge pull request #7497 from masterleinad/top_level_inclusion

Remove dealii using-directives

6 years agoRemove top-level dealii using-directive 7497/head
Daniel Arndt [Mon, 3 Dec 2018 09:01:12 +0000 (10:01 +0100)]
Remove top-level dealii using-directive

6 years agoMerge pull request #7494 from masterleinad/cast_assertdimension
Wolfgang Bangerth [Sat, 1 Dec 2018 16:17:13 +0000 (09:17 -0700)]
Merge pull request #7494 from masterleinad/cast_assertdimension

Cast variables in AssertDimension

6 years agoMerge pull request #7493 from marcfehling/fix-7408
Daniel Arndt [Sat, 1 Dec 2018 09:49:20 +0000 (10:49 +0100)]
Merge pull request #7493 from marcfehling/fix-7408

Specify partitioning algorithm in p::s::Tria tests.

6 years agoSpecify partitioning algorithm in p::s::Tria tests. 7493/head
Marc Fehling [Fri, 30 Nov 2018 23:17:12 +0000 (00:17 +0100)]
Specify partitioning algorithm in p::s::Tria tests.

6 years agoRemove a redefinition of a SuiteSparse type.
David Wells [Fri, 30 Nov 2018 16:41:24 +0000 (11:41 -0500)]
Remove a redefinition of a SuiteSparse type.

6 years agoNamespace some macros.
David Wells [Fri, 30 Nov 2018 16:41:09 +0000 (11:41 -0500)]
Namespace some macros.

6 years agoMerge pull request #7488 from masterleinad/fix_sundials
Daniel Arndt [Fri, 30 Nov 2018 18:02:41 +0000 (19:02 +0100)]
Merge pull request #7488 from masterleinad/fix_sundials

Fix compiling with older SUNDIALS

6 years agoCast variables in AssertDimension 7494/head
Daniel Arndt [Fri, 30 Nov 2018 11:34:19 +0000 (12:34 +0100)]
Cast variables in AssertDimension

6 years agoMerge pull request #7490 from marcfehling/cell-iterator
David Wells [Fri, 30 Nov 2018 15:33:10 +0000 (10:33 -0500)]
Merge pull request #7490 from marcfehling/cell-iterator

Use const refs on cell_iterators instead of copies in hp::DoFHandler.

6 years agoUse const refs on cell_iterators instead of copying them in hp::DoFHandler. 7490/head
Marc Fehling [Fri, 30 Nov 2018 12:01:44 +0000 (13:01 +0100)]
Use const refs on cell_iterators instead of copying them in hp::DoFHandler.

6 years agoProvide alternative output for mpi/hp_cell_weights_03 7489/head
Daniel Arndt [Fri, 30 Nov 2018 11:34:19 +0000 (12:34 +0100)]
Provide alternative output for mpi/hp_cell_weights_03

6 years agoFix compiling with older SUNDIALS 7488/head
Daniel Arndt [Fri, 30 Nov 2018 08:43:52 +0000 (09:43 +0100)]
Fix compiling with older SUNDIALS

6 years agoMerge pull request #7408 from marcfehling/hp-feidx-parent
Wolfgang Bangerth [Fri, 30 Nov 2018 04:41:30 +0000 (21:41 -0700)]
Merge pull request #7408 from marcfehling/hp-feidx-parent

Set the active_fe_index of coarsened cells based on their children.

6 years agoMerge pull request #7486 from masterleinad/avoid_c_style_cast_7
Wolfgang Bangerth [Fri, 30 Nov 2018 04:30:36 +0000 (21:30 -0700)]
Merge pull request #7486 from masterleinad/avoid_c_style_cast_7

Avoid C-style cast in fe

6 years agoMerge pull request #7485 from masterleinad/avoid_c_style_cast_6
Wolfgang Bangerth [Fri, 30 Nov 2018 04:29:28 +0000 (21:29 -0700)]
Merge pull request #7485 from masterleinad/avoid_c_style_cast_6

Avoid C-style cast in grid

6 years agoMerge pull request #7482 from masterleinad/avoid_c_style_cast_5
Daniel Arndt [Thu, 29 Nov 2018 18:15:27 +0000 (19:15 +0100)]
Merge pull request #7482 from masterleinad/avoid_c_style_cast_5

Avoid C-style cast in sundials

6 years agoUse previous style for checking reference type dynamic_casts 7486/head
Daniel Arndt [Thu, 29 Nov 2018 18:10:01 +0000 (19:10 +0100)]
Use previous style for checking reference type dynamic_casts

6 years agoApplied suggestions. To be squashed. 7408/head
Marc Fehling [Thu, 29 Nov 2018 12:21:55 +0000 (13:21 +0100)]
Applied suggestions. To be squashed.

6 years agoAvoid C-style cast in fe
Daniel Arndt [Thu, 29 Nov 2018 15:32:44 +0000 (16:32 +0100)]
Avoid C-style cast in fe

6 years agoReadd some static_casts 7485/head
Daniel Arndt [Thu, 29 Nov 2018 14:09:20 +0000 (15:09 +0100)]
Readd some static_casts

6 years agoMerge pull request #7483 from kronbichler/fix_matrixfree_faces_assert
Bruno Turcksin [Thu, 29 Nov 2018 13:27:27 +0000 (08:27 -0500)]
Merge pull request #7483 from kronbichler/fix_matrixfree_faces_assert

 Fix bug with ghost face detection in MatrixFree

6 years agoDon't use static_cast<int> in grid_out.cc
Daniel Arndt [Thu, 29 Nov 2018 13:24:38 +0000 (14:24 +0100)]
Don't use static_cast<int> in grid_out.cc

6 years agoMerge pull request #7484 from tjhei/cmake_adolc_werror
Jean-Paul Pelteret [Thu, 29 Nov 2018 13:02:49 +0000 (14:02 +0100)]
Merge pull request #7484 from tjhei/cmake_adolc_werror

cmake: ADOLC and -Werror

6 years agoSimplify cast to signed boundary_id
Daniel Arndt [Thu, 29 Nov 2018 08:58:46 +0000 (09:58 +0100)]
Simplify cast to signed boundary_id

6 years agoAvoid C-style cast in grid
Daniel Arndt [Wed, 28 Nov 2018 21:56:46 +0000 (22:56 +0100)]
Avoid C-style cast in grid

6 years agocmake: ADOLC and -Werror 7484/head
Timo Heister [Wed, 28 Nov 2018 19:09:24 +0000 (14:09 -0500)]
cmake: ADOLC and -Werror

when using -Werror the compile check for adolc fails (the adolc header
produces a couple harmless warnings). Fix this by not giving all deal.II
CXX_FLAGS to the test but only the c++ version info.

6 years agoAdd changelog. 7483/head
Martin Kronbichler [Wed, 28 Nov 2018 16:57:41 +0000 (17:57 +0100)]
Add changelog.

6 years agoAdd test.
Martin Kronbichler [Wed, 28 Nov 2018 16:55:31 +0000 (17:55 +0100)]
Add test.

6 years agoFix bug with ghost face detection in MatrixFree.
Martin Kronbichler [Wed, 28 Nov 2018 16:55:20 +0000 (17:55 +0100)]
Fix bug with ghost face detection in MatrixFree.

6 years agoAvoid C-style cast in sundials 7482/head
Daniel Arndt [Wed, 28 Nov 2018 11:10:11 +0000 (12:10 +0100)]
Avoid C-style cast in sundials

6 years agoMerge pull request #7479 from masterleinad/avoid_c_style_cast_4
Daniel Arndt [Wed, 28 Nov 2018 08:27:26 +0000 (09:27 +0100)]
Merge pull request #7479 from masterleinad/avoid_c_style_cast_4

Avoid C-style cast in dofs

6 years agoMerge pull request #7480 from masterleinad/clang-tidy-complains
Denis Davydov [Wed, 28 Nov 2018 06:23:48 +0000 (07:23 +0100)]
Merge pull request #7480 from masterleinad/clang-tidy-complains

Fix a few clang-tidy complains

6 years agoFix a few clang-tidy complains 7480/head
Daniel Arndt [Tue, 27 Nov 2018 22:57:25 +0000 (23:57 +0100)]
Fix a few clang-tidy complains

6 years agoAvoid C-style cast in dofs 7479/head
Daniel Arndt [Tue, 27 Nov 2018 16:52:29 +0000 (17:52 +0100)]
Avoid C-style cast in dofs

6 years agoMerge pull request #7475 from masterleinad/avoid_c_style_cast_3
Daniel Arndt [Tue, 27 Nov 2018 19:37:30 +0000 (20:37 +0100)]
Merge pull request #7475 from masterleinad/avoid_c_style_cast_3

Avoid C-style cast in distributed

6 years agoMerge pull request #7478 from tjhei/dox_tablehandler
Wolfgang Bangerth [Tue, 27 Nov 2018 17:29:41 +0000 (10:29 -0700)]
Merge pull request #7478 from tjhei/dox_tablehandler

docs: TableHandler fixes

6 years agodocs: TableHandler fixes 7478/head
Timo Heister [Tue, 27 Nov 2018 17:18:34 +0000 (12:18 -0500)]
docs: TableHandler fixes

6 years agoMerge pull request #7471 from masterleinad/non_matching_coupling56
Wolfgang Bangerth [Tue, 27 Nov 2018 15:45:01 +0000 (08:45 -0700)]
Merge pull request #7471 from masterleinad/non_matching_coupling56

Make non_matching/coupling_0[56] more robust

6 years agoMerge pull request #7468 from tjhei/gmg_reorder_simplify
Wolfgang Bangerth [Tue, 27 Nov 2018 15:43:50 +0000 (08:43 -0700)]
Merge pull request #7468 from tjhei/gmg_reorder_simplify

simplify logic for multigrid renumbering

6 years agoMerge pull request #7465 from luca-heltai/nfaces-1d
Wolfgang Bangerth [Tue, 27 Nov 2018 15:42:39 +0000 (08:42 -0700)]
Merge pull request #7465 from luca-heltai/nfaces-1d

Fixed counting of faces for 1d.

6 years agoMerge pull request #7441 from drwells/add-coarse-mesh-description
Wolfgang Bangerth [Tue, 27 Nov 2018 15:41:01 +0000 (08:41 -0700)]
Merge pull request #7441 from drwells/add-coarse-mesh-description

Add GridTools::get_coarse_mesh_description.

6 years agoMerge pull request #7477 from masterleinad/make_alloc_and_copy_safer
Bruno Turcksin [Tue, 27 Nov 2018 15:29:20 +0000 (10:29 -0500)]
Merge pull request #7477 from masterleinad/make_alloc_and_copy_safer

Make alloc_and_copy safer

6 years agoMerge pull request #7476 from masterleinad/use_shared_ptr_partitioner_cuda_matrix_free
Bruno Turcksin [Tue, 27 Nov 2018 15:25:49 +0000 (10:25 -0500)]
Merge pull request #7476 from masterleinad/use_shared_ptr_partitioner_cuda_matrix_free

Use shared_ptr for Partitioner in CUDAWrappers::MatrixFree

6 years agoMake alloc_and_copy safer 7477/head
Daniel Arndt [Tue, 27 Nov 2018 15:04:15 +0000 (16:04 +0100)]
Make alloc_and_copy safer

6 years agoUse shared_ptr for Partitioner in CUDAWrappers::MatrixFree 7476/head
Daniel Arndt [Tue, 27 Nov 2018 14:46:55 +0000 (15:46 +0100)]
Use shared_ptr for Partitioner in CUDAWrappers::MatrixFree

6 years agoMerge pull request #7463 from Rombur/cuda_matrix_free
Daniel Arndt [Tue, 27 Nov 2018 01:06:27 +0000 (02:06 +0100)]
Merge pull request #7463 from Rombur/cuda_matrix_free

Distributed CUDA matrix-free

6 years agoUse unsigned types for loop again 7475/head
Daniel Arndt [Tue, 27 Nov 2018 00:19:30 +0000 (01:19 +0100)]
Use unsigned types for loop again

6 years agoMerge pull request #7461 from dsambit/addGettersProcessGrid
David Wells [Mon, 26 Nov 2018 23:25:44 +0000 (18:25 -0500)]
Merge pull request #7461 from dsambit/addGettersProcessGrid

Added two getter functions in ProcessGrid class

6 years agoAvoid C-style cast in distributed
Daniel Arndt [Mon, 26 Nov 2018 17:45:18 +0000 (18:45 +0100)]
Avoid C-style cast in distributed

6 years agoSimplify merge_triangulations. 7441/head
David Wells [Sun, 11 Nov 2018 22:54:05 +0000 (17:54 -0500)]
Simplify merge_triangulations.

Use the new get_coarse_mesh_description to do most of the work.

6 years agoAdd GridTools::get_coarse_mesh_description.
David Wells [Sun, 11 Nov 2018 22:53:27 +0000 (17:53 -0500)]
Add GridTools::get_coarse_mesh_description.

6 years agoMerge pull request #7473 from masterleinad/avoid_c_style_cast_2
Daniel Arndt [Mon, 26 Nov 2018 17:11:11 +0000 (18:11 +0100)]
Merge pull request #7473 from masterleinad/avoid_c_style_cast_2

Avoid C-style cast in matrix_free

6 years agominor typo and stylistic issue fix 7461/head
Sambit Das [Mon, 26 Nov 2018 15:43:27 +0000 (10:43 -0500)]
minor typo and stylistic issue fix

6 years agoFix tests 7463/head
Author: Daniel Arndt [Mon, 26 Nov 2018 14:09:20 +0000 (14:09 +0000)]
Fix tests

6 years agoAdd changelog entry
Bruno Turcksin [Wed, 21 Nov 2018 14:18:07 +0000 (14:18 +0000)]
Add changelog entry


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