]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
5 years agostep-63 documention follow-up 8250/head
Timo Heister [Fri, 17 May 2019 20:13:39 +0000 (14:13 -0600)]
step-63 documention follow-up

see #8225

5 years agoUpdates to the step-63 introduction.
Wolfgang Bangerth [Fri, 17 May 2019 14:42:37 +0000 (08:42 -0600)]
Updates to the step-63 introduction.

5 years agoMerge pull request #8248 from masterleinad/release_9_1_step-64
Martin Kronbichler [Sun, 19 May 2019 18:39:09 +0000 (20:39 +0200)]
Merge pull request #8248 from masterleinad/release_9_1_step-64

[9.1] Take over step-64 changes

5 years agoStep-64 also depends on step-40. 8248/head
Wolfgang Bangerth [Sat, 18 May 2019 14:58:02 +0000 (08:58 -0600)]
Step-64 also depends on step-40.

5 years agoUpdate the results section of step-64.
Wolfgang Bangerth [Sat, 18 May 2019 14:55:31 +0000 (08:55 -0600)]
Update the results section of step-64.

5 years agoMore updates of examples/step-64/step-64.cu
Wolfgang Bangerth [Sun, 19 May 2019 13:21:20 +0000 (07:21 -0600)]
More updates of examples/step-64/step-64.cu

Co-Authored-By: Daniel Arndt <arndtd@ornl.gov>
5 years agoClarify size of coef
Daniel Arndt [Sat, 18 May 2019 22:42:51 +0000 (00:42 +0200)]
Clarify size of coef

5 years agoUpdate the rest of the code.
Wolfgang Bangerth [Sat, 18 May 2019 14:38:44 +0000 (08:38 -0600)]
Update the rest of the code.

5 years agoRework the first part of step-64.
Wolfgang Bangerth [Sat, 18 May 2019 12:08:39 +0000 (06:08 -0600)]
Rework the first part of step-64.

5 years agoUpdate the introduction to step-64.
Wolfgang Bangerth [Sat, 18 May 2019 10:45:17 +0000 (04:45 -0600)]
Update the introduction to step-64.

While there also adjust the dependencies.

5 years agoMerge pull request #8231 from tamiko/pr_8230
Martin Kronbichler [Fri, 17 May 2019 20:04:15 +0000 (22:04 +0200)]
Merge pull request #8231 from tamiko/pr_8230

[9.1] Take over #8230

5 years agoMerge pull request #8232 from tamiko/pr_8204
Martin Kronbichler [Fri, 17 May 2019 20:03:44 +0000 (22:03 +0200)]
Merge pull request #8232 from tamiko/pr_8204

[9.1] Take over #8204

5 years agoMerge pull request #8233 from tamiko/pr_8228
Martin Kronbichler [Fri, 17 May 2019 20:02:30 +0000 (22:02 +0200)]
Merge pull request #8233 from tamiko/pr_8228

[9.1] Take over #8228

5 years agoUpdates to the step-63 results section. 8233/head
Wolfgang Bangerth [Fri, 17 May 2019 15:09:05 +0000 (09:09 -0600)]
Updates to the step-63 results section.

5 years agoMinor updates to the AD page. 8232/head
Wolfgang Bangerth [Thu, 16 May 2019 15:32:33 +0000 (09:32 -0600)]
Minor updates to the AD page.

Just trying to educate myself about this page.

5 years agoDisable two ADOL-C tests in release configuration 8231/head
Matthias Maier [Fri, 17 May 2019 18:46:57 +0000 (13:46 -0500)]
Disable two ADOL-C tests in release configuration

It turns out that some optimizing compilers (gcc-7 onwards) are very
happy in happily optimizing away in case of undefined behavior (that we
are apparently encountering). Let's just disable these tests in release
configuration.

5 years agoMerge pull request #8227 from masterleinad/general_data_storage_gcc-9_9.1
Martin Kronbichler [Fri, 17 May 2019 15:48:00 +0000 (17:48 +0200)]
Merge pull request #8227 from masterleinad/general_data_storage_gcc-9_9.1

[9.1] Take over #8224

5 years agogcc-9 variant for general_data_storage_01 8227/head
Daniel Arndt [Fri, 17 May 2019 14:40:02 +0000 (10:40 -0400)]
gcc-9 variant for general_data_storage_01

5 years agoMerge pull request #8220 from kronbichler/fix_8218
David Wells [Fri, 17 May 2019 14:41:02 +0000 (10:41 -0400)]
Merge pull request #8220 from kronbichler/fix_8218

[9.1] Take over #8218

5 years agoMove changelog entry into proper place 8220/head
Martin Kronbichler [Fri, 17 May 2019 08:32:41 +0000 (10:32 +0200)]
Move changelog entry into proper place

5 years agoupdate VERSION for release v9.1.0-rc2
Matthias Maier [Fri, 17 May 2019 04:03:49 +0000 (23:03 -0500)]
update VERSION for release

5 years agoMerge pull request #8217 from tamiko/pr_8191
David Wells [Fri, 17 May 2019 01:41:30 +0000 (21:41 -0400)]
Merge pull request #8217 from tamiko/pr_8191

[9.1] Take over #8191

5 years agoAdjust changelog 8217/head
Matthias Maier [Fri, 17 May 2019 01:09:08 +0000 (20:09 -0500)]
Adjust changelog

5 years agoAdjust tolerance in push_forward
Martin Kronbichler [Thu, 16 May 2019 19:56:20 +0000 (21:56 +0200)]
Adjust tolerance in push_forward

5 years agoAdd changelog
Martin Kronbichler [Thu, 16 May 2019 07:39:54 +0000 (09:39 +0200)]
Add changelog

5 years agoThree new test cases to verify the transfinite manifold
Martin Kronbichler [Thu, 16 May 2019 07:37:18 +0000 (09:37 +0200)]
Three new test cases to verify the transfinite manifold

5 years agoMake the transfinite manifold more robust
Martin Kronbichler [Thu, 16 May 2019 07:36:56 +0000 (09:36 +0200)]
Make the transfinite manifold more robust

5 years agoMerge pull request #8216 from tamiko/pr_8208
Daniel Arndt [Thu, 16 May 2019 21:03:13 +0000 (17:03 -0400)]
Merge pull request #8216 from tamiko/pr_8208

[9.1] Take over #8208

5 years agoMerge pull request #8215 from tamiko/pr_8202
Daniel Arndt [Thu, 16 May 2019 21:01:19 +0000 (17:01 -0400)]
Merge pull request #8215 from tamiko/pr_8202

[9.1] Take over #8202

5 years agoMerge pull request #8214 from tamiko/pr_8201
Daniel Arndt [Thu, 16 May 2019 20:59:34 +0000 (16:59 -0400)]
Merge pull request #8214 from tamiko/pr_8201

[9.1] Take over #8201

5 years agoMerge pull request #8213 from tamiko/pr_8186
Daniel Arndt [Thu, 16 May 2019 20:59:09 +0000 (16:59 -0400)]
Merge pull request #8213 from tamiko/pr_8186

[9.1] Take over #8186

5 years agostep-63 typo and add some tutorial keywords 8216/head
Timo Heister [Thu, 16 May 2019 19:15:12 +0000 (13:15 -0600)]
step-63 typo and add some tutorial keywords

5 years agofix name 8215/head
Timo Heister [Thu, 16 May 2019 17:46:53 +0000 (11:46 -0600)]
fix name

5 years agofix doxygen @name tags
Timo Heister [Thu, 16 May 2019 17:05:42 +0000 (11:05 -0600)]
fix doxygen @name tags

5 years agoclang-format: do not break @name lines 8214/head
Timo Heister [Thu, 16 May 2019 16:38:53 +0000 (10:38 -0600)]
clang-format: do not break @name lines

remove hack in scratch_data and add @name to the list of items not to
break automatically.

note: I hate having to fight clang-format.

5 years agodoxygen: two broken lists 8213/head
Timo Heister [Wed, 15 May 2019 17:31:32 +0000 (11:31 -0600)]
doxygen: two broken lists

5 years agoMerge pull request #8211 from tamiko/pr_8200
Martin Kronbichler [Thu, 16 May 2019 20:15:38 +0000 (22:15 +0200)]
Merge pull request #8211 from tamiko/pr_8200

[9.1] Take over #8200

5 years agoMerge pull request #8210 from masterleinad/trilinos_12_14_vector_adaptor_9_1
Matthias Maier [Thu, 16 May 2019 20:12:42 +0000 (15:12 -0500)]
Merge pull request #8210 from masterleinad/trilinos_12_14_vector_adaptor_9_1

[9.1] Take over #8209

5 years agoCMake: Add a safeguard that disables ADOL-C in case SEACASChaco is enabled 8211/head
Matthias Maier [Thu, 16 May 2019 15:33:57 +0000 (10:33 -0500)]
CMake: Add a safeguard that disables ADOL-C in case SEACASChaco is enabled

5 years agoAdd vector_adaptor_02 Trilinos-12.14.1 variant 8210/head
Daniel Arndt [Thu, 16 May 2019 19:48:14 +0000 (15:48 -0400)]
Add vector_adaptor_02 Trilinos-12.14.1 variant

5 years agoMerge pull request #8199 from tamiko/pr_8195
Martin Kronbichler [Thu, 16 May 2019 15:15:26 +0000 (17:15 +0200)]
Merge pull request #8199 from tamiko/pr_8195

[9.1] take over #8195

5 years agoFix documentation in ScratchData 8199/head
Jean-Paul Pelteret [Thu, 16 May 2019 09:27:03 +0000 (11:27 +0200)]
Fix documentation in ScratchData

5 years agoMerge pull request #8190 from tamiko/pr_8188
Martin Kronbichler [Thu, 16 May 2019 07:48:02 +0000 (09:48 +0200)]
Merge pull request #8190 from tamiko/pr_8188

[9.1] Take over #8188

5 years agoundeprecate get_mg_dof_indices 8190/head
Timo Heister [Wed, 15 May 2019 20:00:20 +0000 (14:00 -0600)]
undeprecate get_mg_dof_indices

fixes #7887
While the general function makes sense in assembly, this function is
useful in other situations and makes code more expressive.

5 years agoMerge pull request #8179 from tjhei/r91_pr8178
Wolfgang Bangerth [Wed, 15 May 2019 19:23:22 +0000 (13:23 -0600)]
Merge pull request #8179 from tjhei/r91_pr8178

[9.1] take over #8178

5 years agoMerge pull request #8180 from masterleinad/tutorial_description_61_64_9.1
Wolfgang Bangerth [Wed, 15 May 2019 19:23:01 +0000 (13:23 -0600)]
Merge pull request #8180 from masterleinad/tutorial_description_61_64_9.1

[9.1] Take over #8177

5 years agoMerge pull request #8182 from tjhei/r91-step63changelog
Wolfgang Bangerth [Wed, 15 May 2019 19:17:05 +0000 (13:17 -0600)]
Merge pull request #8182 from tjhei/r91-step63changelog

9.1: move changelog entry for step-63

5 years ago9.1: move changelog entry for step-63 8182/head
Timo Heister [Wed, 15 May 2019 16:08:48 +0000 (10:08 -0600)]
9.1: move changelog entry for step-63

5 years agoAdd description for step-61 and step-64 8180/head
Daniel Arndt [Wed, 15 May 2019 12:54:12 +0000 (08:54 -0400)]
Add description for step-61 and step-64

5 years agofollowup small step-63 edits 8179/head
Timo Heister [Wed, 15 May 2019 15:50:53 +0000 (09:50 -0600)]
followup small step-63 edits

5 years agoMerge pull request #8175 from kronbichler/dealii-9.1-8173
Matthias Maier [Wed, 15 May 2019 15:38:16 +0000 (10:38 -0500)]
Merge pull request #8175 from kronbichler/dealii-9.1-8173

[9.1] take over #8173

5 years agoMerge pull request #8176 from kronbichler/dealii-9.1-8079
Daniel Arndt [Wed, 15 May 2019 13:25:46 +0000 (09:25 -0400)]
Merge pull request #8176 from kronbichler/dealii-9.1-8079

[9.1] Take over #8079

5 years agosmall fixes 8176/head
Timo Heister [Tue, 14 May 2019 17:43:28 +0000 (11:43 -0600)]
small fixes

5 years agofix right test function and Peclet def
tcclevenger [Tue, 14 May 2019 17:15:59 +0000 (11:15 -0600)]
fix right test function and Peclet def

5 years agoaddress change requests
Timo Heister [Tue, 14 May 2019 03:44:14 +0000 (21:44 -0600)]
address change requests

5 years agoIntro and small fixes
tcclevenger [Mon, 13 May 2019 23:46:22 +0000 (17:46 -0600)]
Intro and small fixes

5 years agoIntro and Result fixes
Timo Heister [Mon, 13 May 2019 20:08:45 +0000 (14:08 -0600)]
Intro and Result fixes

5 years agochanges for results.dox, intro outline, corrections
tcclevenger [Mon, 13 May 2019 17:13:57 +0000 (11:13 -0600)]
changes for results.dox, intro outline, corrections

5 years agofix prm formatting, expand prm documentation, doc changes, hook in step-63
Timo Heister [Sun, 12 May 2019 16:57:07 +0000 (10:57 -0600)]
fix prm formatting, expand prm documentation, doc changes, hook in step-63

5 years agoChangelog, prm fixes, initial docs, add new parameters
tcclevenger [Fri, 10 May 2019 19:19:57 +0000 (13:19 -0600)]
Changelog, prm fixes, initial docs, add new parameters

5 years agoFix general_data_storage test 8175/head
Daniel Arndt [Wed, 15 May 2019 04:28:57 +0000 (06:28 +0200)]
Fix general_data_storage test

5 years agoMerge pull request #8172 from tjhei/r91_pr8171
David Wells [Wed, 15 May 2019 04:23:17 +0000 (00:23 -0400)]
Merge pull request #8172 from tjhei/r91_pr8171

[9.1] take over #8171

5 years agostep-32 text in formula spacing 8172/head
Timo Heister [Tue, 14 May 2019 21:51:40 +0000 (15:51 -0600)]
step-32 text in formula spacing

5 years agotwo more warnings
Timo Heister [Tue, 14 May 2019 21:25:46 +0000 (15:25 -0600)]
two more warnings

5 years agofix doxygen formula errors
Timo Heister [Tue, 14 May 2019 21:17:56 +0000 (15:17 -0600)]
fix doxygen formula errors

5 years agoMerge pull request #8169 from drwells/unify-subscriptor-log-9.1
Martin Kronbichler [Tue, 14 May 2019 15:34:53 +0000 (17:34 +0200)]
Merge pull request #8169 from drwells/unify-subscriptor-log-9.1

Unify the log entry for Subscriptor.

5 years agoUnify the log entry for Subscriptor. 8169/head
David Wells [Tue, 14 May 2019 14:23:24 +0000 (10:23 -0400)]
Unify the log entry for Subscriptor.

The remark about rvalue references is no longer correct since we
switched, after the ban on rvalue references, to storing a
std::string (which permits rvalues once more).

5 years agoupdate VERSION for release v9.1.0-rc1
Matthias Maier [Tue, 14 May 2019 14:25:31 +0000 (09:25 -0500)]
update VERSION for release

5 years agoMerge pull request #8167 from tamiko/remove-unfinished
Martin Kronbichler [Tue, 14 May 2019 14:23:33 +0000 (16:23 +0200)]
Merge pull request #8167 from tamiko/remove-unfinished

[9.1] removed unfinished steps (release tasks step 8).

5 years agoremoved unfinished steps (release tasks step 8). 8167/head
Matthias Maier [Tue, 14 May 2019 14:18:00 +0000 (09:18 -0500)]
removed unfinished steps (release tasks step 8).

5 years agoupdate AUTHORS
Matthias Maier [Tue, 14 May 2019 14:12:27 +0000 (09:12 -0500)]
update AUTHORS

5 years agoupdate VERSION
Matthias Maier [Tue, 14 May 2019 13:58:13 +0000 (08:58 -0500)]
update VERSION

5 years agoMerge pull request #8164 from tamiko/update_tag_file
Martin Kronbichler [Tue, 14 May 2019 13:56:07 +0000 (15:56 +0200)]
Merge pull request #8164 from tamiko/update_tag_file

Update TAG file

5 years agoMerge pull request #8163 from tamiko/update-changes-file
Martin Kronbichler [Tue, 14 May 2019 13:52:16 +0000 (15:52 +0200)]
Merge pull request #8163 from tamiko/update-changes-file

Replace individual files by one changelog for the whole release.

5 years agoUpdate TAG file 8164/head
Matthias Maier [Tue, 14 May 2019 13:49:07 +0000 (08:49 -0500)]
Update TAG file

5 years agoRemove now obsolete files. 8163/head
Matthias Maier [Tue, 14 May 2019 13:46:30 +0000 (08:46 -0500)]
Remove now obsolete files.

5 years agoUpdate the changelog file for the release.
Matthias Maier [Tue, 14 May 2019 13:46:05 +0000 (08:46 -0500)]
Update the changelog file for the release.

5 years agoMerge pull request #8158 from kronbichler/fix_trilinos_precondition_test
Matthias Maier [Tue, 14 May 2019 12:47:41 +0000 (07:47 -0500)]
Merge pull request #8158 from kronbichler/fix_trilinos_precondition_test

Adapt test file for Trilinos IC precondition

5 years agoMerge pull request #8159 from kronbichler/fix_grid_tools_guess_pt_owner_02
Martin Kronbichler [Tue, 14 May 2019 12:42:30 +0000 (14:42 +0200)]
Merge pull request #8159 from kronbichler/fix_grid_tools_guess_pt_owner_02

Correct memory access in grid_tools_guess_pt_owner_02

5 years agoMerge pull request #8160 from jppelteret/ad-band_aid_sacado_test
Martin Kronbichler [Tue, 14 May 2019 12:26:16 +0000 (14:26 +0200)]
Merge pull request #8160 from jppelteret/ad-band_aid_sacado_test

Band-aid for a failing AD test

5 years agoBand-aid for a failing AD test 8160/head
Jean-Paul Pelteret [Tue, 14 May 2019 12:02:15 +0000 (14:02 +0200)]
Band-aid for a failing AD test

Sacado::Rad::Advar<Sacado::Fad::Dfad<double>> fails for the second derivatives (nan) with the current evaluation point. This fixes the test, but one still wonders what the underlying issue is :-/

5 years agoMerge pull request #8157 from kronbichler/improve-step-59
Bruno Turcksin [Tue, 14 May 2019 12:13:36 +0000 (08:13 -0400)]
Merge pull request #8157 from kronbichler/improve-step-59

Fix some typos in results of step-59

5 years agoMerge pull request #8154 from tamiko/deuglify_step_42
Martin Kronbichler [Tue, 14 May 2019 11:43:20 +0000 (13:43 +0200)]
Merge pull request #8154 from tamiko/deuglify_step_42

deuglify step-42

5 years agoMerge pull request #8151 from masterleinad/fix_icc_19_warning
Martin Kronbichler [Tue, 14 May 2019 10:53:17 +0000 (12:53 +0200)]
Merge pull request #8151 from masterleinad/fix_icc_19_warning

Avoid ICC-19 warning

5 years agoCorrect memory access in grid_tools_guess_pt_owner_02 8159/head
Martin Kronbichler [Tue, 14 May 2019 10:07:28 +0000 (12:07 +0200)]
Correct memory access in grid_tools_guess_pt_owner_02

5 years agoAdapt test file for Trilinos IC precondition 8158/head
Martin Kronbichler [Tue, 14 May 2019 09:10:03 +0000 (11:10 +0200)]
Adapt test file for Trilinos IC precondition

5 years agoFix some typos in results of step-59 8157/head
Martin Kronbichler [Tue, 14 May 2019 08:40:33 +0000 (10:40 +0200)]
Fix some typos in results of step-59

5 years agoMerge pull request #8135 from kronbichler/gcc9-warning-0
Martin Kronbichler [Tue, 14 May 2019 07:15:47 +0000 (09:15 +0200)]
Merge pull request #8135 from kronbichler/gcc9-warning-0

gcc9 warning: Provide copy constructor for class with operator=

5 years agoMerge pull request #8140 from tamiko/cppcheck-1
Timo Heister [Tue, 14 May 2019 05:23:09 +0000 (23:23 -0600)]
Merge pull request #8140 from tamiko/cppcheck-1

cppcheck: Fix include/deal.II/algorithms/general_data_storage.h

5 years agoMerge pull request #8155 from tjhei/tutorial_improvements
Matthias Maier [Tue, 14 May 2019 05:18:59 +0000 (00:18 -0500)]
Merge pull request #8155 from tjhei/tutorial_improvements

improve tutorial layouts

5 years agoimprove tutorial layouts 8155/head
Timo Heister [Tue, 14 May 2019 05:10:29 +0000 (23:10 -0600)]
improve tutorial layouts

- remove a TODO
- replace aspect URL and use ASPECT not Aspect
- fix some formulas
- use table headers

5 years agodeuglify step-42 8154/head
Matthias Maier [Tue, 14 May 2019 05:06:20 +0000 (00:06 -0500)]
deuglify step-42

5 years agoMerge pull request #8148 from drwells/disable-fp-exceptions-hdf5
Matthias Maier [Tue, 14 May 2019 04:18:55 +0000 (23:18 -0500)]
Merge pull request #8148 from drwells/disable-fp-exceptions-hdf5

Disable floating point exceptions in two HDF5 tests.

5 years agoAvoid ICC-19 warning 8151/head
Daniel Arndt [Tue, 14 May 2019 03:40:19 +0000 (05:40 +0200)]
Avoid ICC-19 warning

5 years agoMerge pull request #8150 from masterleinad/missing_header_symengine
David Wells [Tue, 14 May 2019 03:21:44 +0000 (23:21 -0400)]
Merge pull request #8150 from masterleinad/missing_header_symengine

Add missing header in symengine_tensor_operations.h

5 years agoAdd missing header in symengine_tensor_operations.h 8150/head
Daniel Arndt [Tue, 14 May 2019 03:02:38 +0000 (05:02 +0200)]
Add missing header in symengine_tensor_operations.h

5 years agoMerge pull request #8147 from kronbichler/fix_two_tests
Daniel Arndt [Tue, 14 May 2019 02:16:43 +0000 (22:16 -0400)]
Merge pull request #8147 from kronbichler/fix_two_tests

Make two tests more stable

5 years agoMerge pull request #8142 from drwells/cppcheck-9.1
Daniel Arndt [Tue, 14 May 2019 01:16:36 +0000 (21:16 -0400)]
Merge pull request #8142 from drwells/cppcheck-9.1

Cppcheck 9.1

5 years agoCreate vector before assigning 8135/head
Daniel Arndt [Mon, 13 May 2019 22:52:18 +0000 (00:52 +0200)]
Create vector before assigning

5 years agoMerge pull request #8149 from drwells/add-6774-changelog
Timo Heister [Mon, 13 May 2019 22:44:16 +0000 (16:44 -0600)]
Merge pull request #8149 from drwells/add-6774-changelog

Add a changelog entry for 6774.


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