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https://gitweb.dealii.org/ - dealii.git/log
Daniel Arndt [Thu, 12 Dec 2019 19:17:34 +0000 (14:17 -0500)]
Restrict a few more tests requiring complex values
Daniel Arndt [Thu, 12 Dec 2019 18:14:56 +0000 (13:14 -0500)]
Merge pull request #9144 from bangerth/fe-interface
Add to FEInterfaceValues what we already have in FEValues.
Daniel Arndt [Thu, 12 Dec 2019 16:51:28 +0000 (11:51 -0500)]
Merge pull request #9159 from bangerth/46
Update the results section of step-46.
Wolfgang Bangerth [Wed, 11 Dec 2019 22:23:44 +0000 (15:23 -0700)]
Also update the 3d picture section.
Luca Heltai [Wed, 11 Dec 2019 19:59:36 +0000 (20:59 +0100)]
Merge pull request #9137 from masterleinad/export_artifact_appveyor
Export the built library as artifact in appveyor
Luca Heltai [Wed, 11 Dec 2019 19:58:50 +0000 (20:58 +0100)]
Merge pull request #9070 from luca-heltai/extract-dofs-per-component
Extract dofs per component
Luca Heltai [Wed, 11 Dec 2019 12:58:03 +0000 (13:58 +0100)]
Merge pull request #9162 from masterleinad/fix_some_to_some
Fix MPI::Utilities::some_to_some
Luca Heltai [Thu, 21 Nov 2019 18:38:41 +0000 (19:38 +0100)]
Extract dofs per component
Extract the set of local, active or relevant DoF indices for each
components within the mask that are owned by the current processor. For
components disabled by the mask, an empty IndexSet is returned.
For regular DoFHandler objects, this set is the complete set with all
DoF indices. In either case, it equals what
DoFHandler::locally_owned_dofs() returns. The ownership type is fixed by
a small enum that controls which type of ownership is asked off.
Co-authored-by: Bruno Blais <blais.bruno@gmail.com>
Daniel Arndt [Wed, 11 Dec 2019 04:09:16 +0000 (23:09 -0500)]
Merge pull request #9161 from masterleinad/fix_complex_test
Fix mpi/collective_mean_std
Daniel Arndt [Tue, 10 Dec 2019 23:41:38 +0000 (18:41 -0500)]
Fix MPI::Utilities::some_to_some
Daniel Arndt [Tue, 10 Dec 2019 18:50:02 +0000 (13:50 -0500)]
Fix mpi/collective_mean_std
Wolfgang Bangerth [Tue, 10 Dec 2019 18:26:22 +0000 (11:26 -0700)]
Merge pull request #9045 from eliasstudiert/airfoil_generator
Add airfoil grid generator
Wolfgang Bangerth [Tue, 10 Dec 2019 15:49:37 +0000 (08:49 -0700)]
Update the results section of step-46.
Elias Dejene [Tue, 5 Nov 2019 17:34:13 +0000 (18:34 +0100)]
Add airfoil grid generator.
Wolfgang Bangerth [Tue, 10 Dec 2019 14:50:51 +0000 (07:50 -0700)]
Merge pull request #9124 from luca-heltai/particle-set-id
New set id method in particle.
Luca Heltai [Tue, 10 Dec 2019 11:11:02 +0000 (12:11 +0100)]
Merge pull request #8187 from starki0815/fix_step_46
Fix bug in tutorial step-46
Wolfgang Bangerth [Tue, 10 Dec 2019 04:30:56 +0000 (21:30 -0700)]
Merge pull request #9069 from luca-heltai/insert-global-particles
Insert particles globally.
Wolfgang Bangerth [Tue, 10 Dec 2019 04:21:53 +0000 (21:21 -0700)]
Merge pull request #9071 from luca-heltai/map-dofs-to-support-points-mask
Map dofs to support points
Daniel Arndt [Tue, 10 Dec 2019 00:13:20 +0000 (19:13 -0500)]
Merge pull request #9143 from drwells/cleanup-function-parser
Cleanup function parser
David Wells [Mon, 9 Dec 2019 21:12:34 +0000 (16:12 -0500)]
Merge pull request #9158 from bangerth/doc-88
Better document WorkStream and mesh_loop().
David Wells [Thu, 5 Dec 2019 16:44:50 +0000 (11:44 -0500)]
Clarify the destructor for FunctionParser.
David Wells [Thu, 5 Dec 2019 16:43:17 +0000 (11:43 -0500)]
Delete some used code.
David Wells [Thu, 5 Dec 2019 16:25:32 +0000 (11:25 -0500)]
Remove an unused using declaration.
David Wells [Thu, 5 Dec 2019 16:10:23 +0000 (11:10 -0500)]
Use a ranged-for loop.
Daniel Arndt [Mon, 9 Dec 2019 19:02:17 +0000 (14:02 -0500)]
Merge pull request #9154 from peterrum/ecl-access-neighbors
ECL: access neighboring cells
Wolfgang Bangerth [Mon, 9 Dec 2019 18:50:17 +0000 (11:50 -0700)]
Merge pull request #9053 from luca-heltai/compute_mesh_predicate_bounding_box_bug
Bug in grid_tools compute_mesh_predicate_bounding_box for dim!=spacedim triangulations
Wolfgang Bangerth [Thu, 5 Dec 2019 20:05:15 +0000 (13:05 -0700)]
Add to FEInterfaceValues what we already have in FEValues.
Wolfgang Bangerth [Mon, 9 Dec 2019 17:51:58 +0000 (10:51 -0700)]
Better document WorkStream and mesh_loop().
Peter Munch [Sun, 8 Dec 2019 13:59:54 +0000 (14:59 +0100)]
Access neighbors during ECL
David Wells [Sun, 8 Dec 2019 03:13:35 +0000 (22:13 -0500)]
Merge pull request #9152 from masterleinad/typsest_lame
Spell Lamé correctly
Daniel Arndt [Sat, 7 Dec 2019 23:28:51 +0000 (18:28 -0500)]
Merge pull request #9150 from masterleinad/fix_warnings_python_bindings
Avoid some warnings in python-bindings
Daniel Arndt [Sat, 7 Dec 2019 16:39:08 +0000 (11:39 -0500)]
Typeset Lame correctly
Daniel Arndt [Fri, 6 Dec 2019 23:16:59 +0000 (18:16 -0500)]
Avoid some warnings in python-bindings
Wolfgang Bangerth [Fri, 6 Dec 2019 22:24:27 +0000 (15:24 -0700)]
Merge pull request #9140 from marcfehling/fixed-number-threshold
Adjusted thresholds for 'refine_and_coarsen_fixed_number'.
David Wells [Fri, 6 Dec 2019 15:50:57 +0000 (10:50 -0500)]
Merge pull request #9083 from bangerth/includes
Make sure all .h files include config.h.
Daniel Arndt [Fri, 6 Dec 2019 13:52:42 +0000 (08:52 -0500)]
Merge pull request #9142 from blaisb/colorize_subdivided_hyper_cube
Added the colorize option to subdivided_hyper_cube grid generator
Daniel Arndt [Fri, 6 Dec 2019 13:51:47 +0000 (08:51 -0500)]
Merge pull request #9146 from masterleinad/compile_lapack_separately
Compile files using the LAPACK wrappers separately
Martin Kronbichler [Fri, 6 Dec 2019 07:16:11 +0000 (08:16 +0100)]
Merge pull request #9145 from bangerth/direct
Simplify references to tutorial programs.
marcfehling [Thu, 5 Dec 2019 20:55:06 +0000 (21:55 +0100)]
Adjusted test output after changes to GridRefinement and parallel::distributed::GridRefinement.
Daniel Arndt [Thu, 5 Dec 2019 23:44:28 +0000 (18:44 -0500)]
Merge pull request #9109 from agrayver/add_manifold_python_support
Add python wrappers for manifolds and extend tria wrappers
Daniel Arndt [Thu, 5 Dec 2019 23:41:36 +0000 (18:41 -0500)]
Merge pull request #9093 from tcclevenger/solver_idr
add idr(s) solver
Bruno Blais [Thu, 5 Dec 2019 14:45:58 +0000 (09:45 -0500)]
Added the colorize option to subdivided_hyper_cube grid generator
The subdivided_hyper_cube is the one of the only grid generator which
does not allow the boundaries to be colorized. This is a non-standard
behavior, because all of the other generators (hyper_cube,
hyper_rectangle, subdivided_hyper_rectangle) allow one to colorize the
boundaries. This small pull request addresses this by adding the
colorize option to the subdivided_hyper_cube grid. It also fixes the
grid_generator_from_name to make it coherent with the new
implementaiton.
Daniel Arndt [Thu, 5 Dec 2019 23:25:58 +0000 (18:25 -0500)]
Compile files using the LAPACK wrappers separately
marcfehling [Thu, 5 Dec 2019 20:54:25 +0000 (21:54 +0100)]
Adjusted ranges for GridRefinement::refine_and_coarsen_fixed_fraction().
marcfehling [Thu, 5 Dec 2019 20:53:58 +0000 (21:53 +0100)]
Adjusted thresholds for refine_and_coarsen_fixed_number() for both GridRefinement and parallel::distributed::GridRefinement.
Alexander Grayver [Mon, 2 Dec 2019 14:47:22 +0000 (15:47 +0100)]
Add more methods to work with manifolds. Add python tests
Wolfgang Bangerth [Thu, 5 Dec 2019 20:07:23 +0000 (13:07 -0700)]
Simplify references to tutorial programs.
David Wells [Thu, 5 Dec 2019 16:08:27 +0000 (11:08 -0500)]
Clean up FunctionParser's documentation a bit.
Reflow comments, use doxygen commands, improve some formatting.
tcclevenger [Thu, 5 Dec 2019 15:59:30 +0000 (10:59 -0500)]
changelog
tcclevenger [Mon, 30 Sep 2019 07:08:26 +0000 (03:08 -0400)]
add idr(s) solver
Bruno Blais [Thu, 5 Dec 2019 13:24:30 +0000 (08:24 -0500)]
- Fixed indentation
- Fixed documentation of dof_tools
- Added the const modified for the dof_comp
David Wells [Thu, 5 Dec 2019 04:06:18 +0000 (23:06 -0500)]
Merge pull request #9141 from marcfehling/hp-threshold
hp::Refinement: Adjusted comparator defaults to be in accordance with GridRefinement equivalents
David Wells [Thu, 5 Dec 2019 04:05:48 +0000 (23:05 -0500)]
Merge pull request #9139 from bangerth/grammar
Be consistent in capitalizing text. Other minor updates.
Marc Fehling [Wed, 4 Dec 2019 22:10:32 +0000 (23:10 +0100)]
hp::Refinement: Adjusted comparator defaults to be in accordance with GridRefinement equivalents.
David Wells [Wed, 4 Dec 2019 19:20:32 +0000 (14:20 -0500)]
Merge pull request #9067 from marcfehling/hpref-assert
hp::Refinement::predict_error: Detangle assertions.
Martin Kronbichler [Wed, 4 Dec 2019 13:48:05 +0000 (14:48 +0100)]
Merge pull request #9126 from bangerth/doc
Add some documentation.
Martin Kronbichler [Wed, 4 Dec 2019 08:10:11 +0000 (09:10 +0100)]
Merge pull request #9138 from bangerth/doc-87
Minor grammar updates.
Martin Kronbichler [Wed, 4 Dec 2019 08:09:04 +0000 (09:09 +0100)]
Merge pull request #9136 from bangerth/61-5
Link to a paper that describes step-61.
Martin Kronbichler [Wed, 4 Dec 2019 08:07:53 +0000 (09:07 +0100)]
Merge pull request #9128 from bangerth/61-2
Break postprocessing the velocity out of the function that computes errors
Wolfgang Bangerth [Wed, 4 Dec 2019 06:08:09 +0000 (23:08 -0700)]
Be consistent in capitalizing test. Other minor updates.
In the first column, all but one entry were capitalized. This greatly irks me. While there,
also capitalize all other places where text starts. Finally, there is no need to
abbreviate 'info' -- we have plenty of space in the table heading to use proper
words in their full glory.
Wolfgang Bangerth [Wed, 4 Dec 2019 06:01:34 +0000 (23:01 -0700)]
Minor grammar updates.
Daniel Arndt [Tue, 3 Dec 2019 22:29:14 +0000 (17:29 -0500)]
Merge pull request #9130 from bangerth/61-4
Use a better way to create graphical output in step-61.
Daniel Arndt [Tue, 3 Dec 2019 22:27:41 +0000 (17:27 -0500)]
Merge pull request #9133 from bangerth/std_cxx11
Deprecate the files in base/std_cxx11 -- we no longer need them.
Daniel Arndt [Mon, 2 Dec 2019 22:16:39 +0000 (17:16 -0500)]
Export the built library as artifact in appveyor
Wolfgang Bangerth [Tue, 3 Dec 2019 18:36:07 +0000 (11:36 -0700)]
Link to a paper that describes step-61.
Wolfgang Bangerth [Tue, 3 Dec 2019 18:20:33 +0000 (11:20 -0700)]
Use DEAL_II_WARNING instead.
Wolfgang Bangerth [Tue, 3 Dec 2019 01:54:41 +0000 (18:54 -0700)]
Add changelog entry.
Wolfgang Bangerth [Tue, 3 Dec 2019 01:53:21 +0000 (18:53 -0700)]
Deprecate the files in base/std_cxx11 -- we no longer need them.
Wolfgang Bangerth [Tue, 3 Dec 2019 00:31:28 +0000 (17:31 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Tue, 3 Dec 2019 00:29:55 +0000 (17:29 -0700)]
Use a better way to create graphical output in step-61.
Specifically, rather than creating two output files for the cell pressures
and the Darcy velocities, put them all into a single file using a method
that @kronbichler introduced a while ago.
Luca Heltai [Tue, 3 Dec 2019 17:29:11 +0000 (18:29 +0100)]
Addressed last comments by WB.
Luca Heltai [Tue, 3 Dec 2019 16:48:21 +0000 (17:48 +0100)]
Added missing headers in tests.
Luca Heltai [Tue, 3 Dec 2019 12:56:32 +0000 (13:56 +0100)]
Restructured with fix of some_to_some.
David Wells [Tue, 3 Dec 2019 16:21:12 +0000 (11:21 -0500)]
Merge pull request #9127 from bangerth/61-1
Augment step-61 documentation.
Matthias Maier [Tue, 3 Dec 2019 15:59:53 +0000 (09:59 -0600)]
Merge pull request #9117 from marcfehling/fix-pthread
Fixed cmake 3.16.0 incompatibility.
Daniel Arndt [Tue, 3 Dec 2019 13:18:46 +0000 (08:18 -0500)]
Merge pull request #9132 from bangerth/std_cxx1x
Remove long deprecated headers for C++1x.
Martin Kronbichler [Tue, 3 Dec 2019 10:25:41 +0000 (11:25 +0100)]
Merge pull request #9131 from bangerth/mpi
Clarify Utilities::MPI::some_to_some().
Luca Heltai [Tue, 3 Dec 2019 07:38:36 +0000 (08:38 +0100)]
Applied suggestions.
Luca Heltai [Mon, 2 Dec 2019 17:00:31 +0000 (18:00 +0100)]
New set id method in particle.
Martin Kronbichler [Tue, 3 Dec 2019 07:25:18 +0000 (08:25 +0100)]
Merge pull request #9129 from bangerth/61-3
Use 5 refinements in step-61 as default.
Luca Heltai [Thu, 28 Nov 2019 18:47:38 +0000 (19:47 +0100)]
Added comments in tests.
Luca Heltai [Thu, 28 Nov 2019 18:38:12 +0000 (19:38 +0100)]
Code review.
Luca Heltai [Thu, 28 Nov 2019 18:07:25 +0000 (19:07 +0100)]
Apply suggestions from code review
Co-Authored-By: Rene Gassmoeller <rene.gassmoeller@mailbox.org>
Luca Heltai [Mon, 25 Nov 2019 10:12:34 +0000 (11:12 +0100)]
Removed unused variable.
Luca Heltai [Mon, 25 Nov 2019 09:41:14 +0000 (10:41 +0100)]
ChangeLog.
Luca Heltai [Mon, 25 Nov 2019 09:41:07 +0000 (10:41 +0100)]
Moved implementation to .cc file.
Luca Heltai [Thu, 21 Nov 2019 18:30:17 +0000 (19:30 +0100)]
Insert particles globally.
Create and insert a number of particles into the collection of
particles.
This function takes a list of positions and creates a set of particles
at these positions, which are then distributed and added to the local
particle collection of a procesor. Note that this function uses
GridTools::distributed_compute_point_locations. Consequently, it can
require intense communications between the processors.
Co-authored-by: Bruno Blais <blais.bruno@gmail.com>
Martin Kronbichler [Tue, 3 Dec 2019 07:17:27 +0000 (08:17 +0100)]
Merge pull request #9104 from masterleinad/mf_cuda_float
Allow using float shape functions
Wolfgang Bangerth [Tue, 3 Dec 2019 01:36:56 +0000 (18:36 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Tue, 3 Dec 2019 01:30:27 +0000 (18:30 -0700)]
Remove long deprecated headers for C++1x.
Wolfgang Bangerth [Tue, 3 Dec 2019 01:34:03 +0000 (18:34 -0700)]
Remove references to old std_cxx1x namespace.
Wolfgang Bangerth [Tue, 3 Dec 2019 01:31:24 +0000 (18:31 -0700)]
Remove a test no longer necessary.
Wolfgang Bangerth [Tue, 3 Dec 2019 01:07:09 +0000 (18:07 -0700)]
Clarify Utilities::MPI::some_to_some().
Wolfgang Bangerth [Tue, 3 Dec 2019 01:04:16 +0000 (18:04 -0700)]
Merge pull request #9121 from luca-heltai/fix-some-to-some
Fix some to some.
Wolfgang Bangerth [Tue, 3 Dec 2019 00:42:41 +0000 (17:42 -0700)]
Make sure all .h files include config.h.
Wolfgang Bangerth [Tue, 3 Dec 2019 00:05:19 +0000 (17:05 -0700)]
Use 5 refinements in step-61 as default.
Marc Fehling [Thu, 21 Nov 2019 17:11:01 +0000 (18:11 +0100)]
hp::Refinement::predict_error: Detangle assertions.
Bruno Blais [Mon, 2 Dec 2019 23:45:48 +0000 (18:45 -0500)]
Refactored map_dofs_to_support_points to allow for the use of a mask and removed the additional function that had been introduced
Luca Heltai [Thu, 21 Nov 2019 18:47:14 +0000 (19:47 +0100)]
Map dofs to support points
Same function as the old ones, but returns an IndexSet
per component.
Co-authored-by: Bruno Blais <blais.bruno@gmail.com>
Wolfgang Bangerth [Mon, 2 Dec 2019 22:57:52 +0000 (15:57 -0700)]
Add a changelog entry.
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