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https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Wed, 5 Feb 2020 01:21:41 +0000 (18:21 -0700)]
Say something about local conservation in step-20.
David Wells [Tue, 4 Feb 2020 15:51:24 +0000 (10:51 -0500)]
Merge pull request #9470 from bangerth/20
Address a question on the mailing list about step-20.
Wolfgang Bangerth [Mon, 3 Feb 2020 02:37:04 +0000 (19:37 -0700)]
Clarify something about the matrix in step-20.
Martin Kronbichler [Tue, 4 Feb 2020 08:19:07 +0000 (09:19 +0100)]
Merge pull request #9393 from krishnakumarg1984/step7_fix_norms
In step-7, removes the explicit listing of various norms since the list is anyway outdated
Martin Kronbichler [Tue, 4 Feb 2020 08:17:58 +0000 (09:17 +0100)]
Merge pull request #9428 from agrayver/add_quadrature_python_binds
Add python wrappers for Quadrature
Daniel Arndt [Mon, 3 Feb 2020 20:13:24 +0000 (15:13 -0500)]
Merge pull request #9467 from bangerth/faces
Use cell->face_iterators() or GeometryInfo::face_indices() in the tutorials.
Daniel Arndt [Mon, 3 Feb 2020 19:36:14 +0000 (13:36 -0600)]
Fix indentation
Martin Kronbichler [Mon, 3 Feb 2020 18:34:59 +0000 (19:34 +0100)]
Merge pull request #9471 from peterrum/consensus_template
Move implementation of ConsenusAlgorithm into mpi.templates.h
David Wells [Mon, 3 Feb 2020 14:19:02 +0000 (09:19 -0500)]
Merge pull request #9466 from bangerth/dataout
Fix an overzealous assertion related to Dataout
Martin Kronbichler [Mon, 3 Feb 2020 11:11:43 +0000 (12:11 +0100)]
Merge pull request #9468 from bangerth/bb
Update documentation of NeighborType.
Martin Kronbichler [Mon, 3 Feb 2020 10:16:14 +0000 (11:16 +0100)]
Merge pull request #9469 from tamiko/fix_test_regex
CMake: Make TEST_PICKUP_REGEX stricter
Peter Munch [Mon, 3 Feb 2020 10:05:07 +0000 (11:05 +0100)]
Move implementation of ConsenusAlgorithm into mpi.templates.h
Wolfgang Bangerth [Mon, 3 Feb 2020 09:50:20 +0000 (10:50 +0100)]
Merge pull request #9465 from peterrum/consensus_change_type
Fix types in ConsensusAlgorithmProcess
Matthias Maier [Mon, 3 Feb 2020 02:29:50 +0000 (20:29 -0600)]
CMake: Make TEST_PICKUP_REGEX stricter
When applying TEST_PICKUP_REGEX we now only match against
"${category}/${basename}" of a test (excluding all configuration options
after the first period (".").
Closes #9420
Wolfgang Bangerth [Mon, 3 Feb 2020 02:00:14 +0000 (19:00 -0700)]
Update documentation of NeighborType.
Wolfgang Bangerth [Mon, 3 Feb 2020 01:47:22 +0000 (18:47 -0700)]
Use cell->face_iterators() or GeometryInfo::face_indices() in the tutorials.
Wolfgang Bangerth [Sun, 2 Feb 2020 22:57:25 +0000 (15:57 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Sun, 2 Feb 2020 22:57:09 +0000 (15:57 -0700)]
Add a test.
Wolfgang Bangerth [Sun, 2 Feb 2020 22:56:41 +0000 (15:56 -0700)]
Fix an overzealous assertion.
Peter Munch [Sun, 2 Feb 2020 22:33:02 +0000 (23:33 +0100)]
Fix types in ConsensusAlgorithmProcess
David Wells [Sun, 2 Feb 2020 21:59:26 +0000 (16:59 -0500)]
Merge pull request #9464 from tjhei/doxygen_fixes2
doxygen documentation fixes
Martin Kronbichler [Sun, 2 Feb 2020 16:03:55 +0000 (17:03 +0100)]
Merge pull request #9463 from bangerth/dataout
Really minor stuff.
Timo Heister [Sun, 2 Feb 2020 16:01:17 +0000 (11:01 -0500)]
doxygen documentation fixes
Wolfgang Bangerth [Sun, 2 Feb 2020 08:03:53 +0000 (09:03 +0100)]
Merge pull request #9456 from jppelteret/fix_compiler_error_01
Fix SymmetricTensor and Tensor ProductType
David Wells [Sun, 2 Feb 2020 02:57:32 +0000 (21:57 -0500)]
Merge pull request #9458 from jppelteret/fix_trilinos_sacado_cmake_test
Fix a broken Trilinos Sacado CMake test
David Wells [Sun, 2 Feb 2020 01:39:22 +0000 (20:39 -0500)]
Merge pull request #9461 from masterleinad/fix_doftools_doxygen
Add a missing @endcode in DoFTools documentation
Daniel Arndt [Sun, 2 Feb 2020 01:32:53 +0000 (20:32 -0500)]
Add a missing @endcode in DoFTools documentation
Jean-Paul Pelteret [Sat, 1 Feb 2020 21:58:29 +0000 (22:58 +0100)]
Add missing include to a Trilinos Sacado CMake test
Jean-Paul Pelteret [Sat, 1 Feb 2020 19:00:04 +0000 (20:00 +0100)]
Fix SymmetricTensor and Tensor ProductType
Fixes a compiler error on the old Apple Clang 8.0.0 compiler, where the product type between complex numbers and tensors could not be determined.
Wolfgang Bangerth [Sat, 1 Feb 2020 12:36:28 +0000 (05:36 -0700)]
Clarify a sentence.
Wolfgang Bangerth [Sat, 1 Feb 2020 12:36:20 +0000 (05:36 -0700)]
Reindent a couple of comments.
Wolfgang Bangerth [Fri, 31 Jan 2020 20:38:08 +0000 (13:38 -0700)]
Merge pull request #9454 from tjhei/mpi_check_return
check MPI return value in one location
Timo Heister [Fri, 31 Jan 2020 18:40:01 +0000 (13:40 -0500)]
check MPI return value in one location
Timo Heister [Fri, 31 Jan 2020 15:49:00 +0000 (10:49 -0500)]
Merge pull request #9453 from simonsticko/fix_solution_transfer_spelling
Fix a few misprints in the SolutionTransfer documentation.
Simon Sticko [Fri, 31 Jan 2020 15:39:48 +0000 (16:39 +0100)]
Fix a few misprints in the SolutionTransfer documentation.
Martin Kronbichler [Fri, 31 Jan 2020 09:53:59 +0000 (10:53 +0100)]
Merge pull request #9450 from bangerth/warnings
Avoid a few warnings about unused variables.
Martin Kronbichler [Fri, 31 Jan 2020 09:53:46 +0000 (10:53 +0100)]
Merge pull request #9449 from bangerth/ice
Avoid an internal compiler error in gcc 7.4.0.
Martin Kronbichler [Fri, 31 Jan 2020 07:01:28 +0000 (08:01 +0100)]
Merge pull request #9448 from GrahamBenHarper/graham_dev_hhs_doc
Update GridGenerator::half_hyper_shell documentation for correctness
Wolfgang Bangerth [Thu, 30 Jan 2020 17:11:52 +0000 (10:11 -0700)]
Avoid a few warnings about unused variables.
Wolfgang Bangerth [Thu, 30 Jan 2020 16:59:48 +0000 (09:59 -0700)]
Leave a comment.
Wolfgang Bangerth [Thu, 30 Jan 2020 16:58:00 +0000 (09:58 -0700)]
Avoid a warning about an unused variable.
Graham Harper [Thu, 30 Jan 2020 04:32:52 +0000 (21:32 -0700)]
Add test for boundary ids for GridGenerator::half_hyper_shell
Wolfgang Bangerth [Thu, 30 Jan 2020 16:38:49 +0000 (09:38 -0700)]
Avoid an internal compiler error in gcc 7.4.0.
Luca Heltai [Thu, 30 Jan 2020 14:06:05 +0000 (15:06 +0100)]
Merge pull request #9434 from peterrum/ph_json_optional
Further changes to ParameterHandler::parse_input_from_json
Graham Harper [Thu, 30 Jan 2020 03:25:43 +0000 (20:25 -0700)]
Update GridGenerator::half_hyper_shell documentation for correctness
Daniel Arndt [Thu, 30 Jan 2020 00:03:04 +0000 (19:03 -0500)]
Merge pull request #9445 from elauksap/parameter_handler_path_exists
Add ParameterHandler::subsection_path_exists
Daniel Arndt [Thu, 30 Jan 2020 00:02:49 +0000 (19:02 -0500)]
Merge pull request #9447 from GrahamBenHarper/graham_dev_polynomials_adini
Update PolynomialsAdini to derive from ScalarPolynomialsBase
grahambenharper [Mon, 27 Jan 2020 23:59:57 +0000 (16:59 -0700)]
Update PolynomialsAdini to derive from ScalarPolynomialsBase and add a test for it
Pasquale Africa [Tue, 28 Jan 2020 21:25:49 +0000 (21:25 +0000)]
Add ParameterHandler::subsection_path_exists()
Daniel Arndt [Wed, 29 Jan 2020 14:16:13 +0000 (09:16 -0500)]
Merge pull request #9156 from peterrum/ecl-partitioner
ECL: add partitioners
Wolfgang Bangerth [Wed, 29 Jan 2020 13:26:20 +0000 (06:26 -0700)]
Merge pull request #9407 from simonsticko/semi_flux_sparsity_pattern
make_flux_sparsity_pattern with flux couplings on a subset of the faces
Peter Munch [Sun, 8 Dec 2019 23:18:19 +0000 (00:18 +0100)]
Add ecl partitioners
Peter Munch [Mon, 27 Jan 2020 07:22:48 +0000 (08:22 +0100)]
Further changes to ParameterHandler::parse_input_from_json
Conflicts:
source/base/parameter_handler.cc
Luca Heltai [Wed, 29 Jan 2020 08:44:30 +0000 (09:44 +0100)]
Merge pull request #9171 from luca-heltai/symbolic-function
Symbolic function.
Simon Sticko [Tue, 14 Jan 2020 10:29:15 +0000 (11:29 +0100)]
make_flux_sparsity_pattern with flux couplings on a subset of the faces
Add an optional std::function input parameter to
make_flux_sparsity_pattern which describe over which faces there should
be flux couplings in the created sparsity pattern.
internal::make_flux_sparsity_pattern has one implementation for a
generic DoFHandlerType and a specialization for hp::DoFHandler. To
circument a bug where MSVC can't deduce which of these internal
functions should be called, change DoFHandlerType to
dealii::DoFHandler in the generic function.
To avoid another bug where MSVC can't construct a templated class,
call one of the overloaded versions of make_flux_sparsity_pattern with
always_couple_on_faces (even if this is already the default value).
Wolfgang Bangerth [Wed, 29 Jan 2020 00:18:58 +0000 (17:18 -0700)]
Merge pull request #9443 from tjhei/parameter_handler_cleanup
make two ParameterHandler members local to .cc
Wolfgang Bangerth [Tue, 28 Jan 2020 22:22:40 +0000 (15:22 -0700)]
Merge pull request #9444 from masterleinad/fix_fulldistributed_tests
Fix a few parallel::fullydistributed tests
Timo Heister [Tue, 28 Jan 2020 20:33:20 +0000 (15:33 -0500)]
make two ParameterHandler members local to .cc
These two (static) private member functions can also be in the anonymous
namespace instead. Follow-up to #9263
Daniel Arndt [Tue, 28 Jan 2020 20:47:53 +0000 (15:47 -0500)]
Fix a few parallel::fullydistributed tests
Wolfgang Bangerth [Tue, 28 Jan 2020 20:27:44 +0000 (13:27 -0700)]
Merge pull request #9441 from GrahamBenHarper/graham_dev_fully_dist
Remove fully_distributed_tria_util files
Timo Heister [Tue, 28 Jan 2020 20:19:52 +0000 (15:19 -0500)]
Merge pull request #9263 from elauksap/parameter_handler_sorting
ParameterHandler in unsorted order
grahambenharper [Tue, 28 Jan 2020 19:50:52 +0000 (12:50 -0700)]
Remove fully_distributed_tria_util files
Timo Heister [Tue, 28 Jan 2020 16:10:43 +0000 (11:10 -0500)]
Merge pull request #9437 from GrahamBenHarper/graham_dev_clean_compute
Update uses of compute() to evaluate()
Luca Heltai [Sat, 14 Dec 2019 20:03:03 +0000 (21:03 +0100)]
Symbolic function.
Pasquale Africa [Tue, 21 Jan 2020 23:23:00 +0000 (23:23 +0000)]
ParameterHandler can now print in unsorted order
Wolfgang Bangerth [Tue, 28 Jan 2020 04:19:15 +0000 (21:19 -0700)]
Merge pull request #9430 from peterrum/ph_json_action
Fix ParameterHandler::read_xml_recursively for actions
Wolfgang Bangerth [Tue, 28 Jan 2020 04:19:01 +0000 (21:19 -0700)]
Merge pull request #9432 from peterrum/tria_new_create_triangulation_followup
Fix remaining issues for #9195
Wolfgang Bangerth [Tue, 28 Jan 2020 04:18:27 +0000 (21:18 -0700)]
Merge pull request #9436 from GrahamBenHarper/graham_dev_clean_ex6
Remove unused included file from step-6
Wolfgang Bangerth [Mon, 27 Jan 2020 22:25:11 +0000 (15:25 -0700)]
Merge pull request #9431 from MFraters/fix_particle_probability_density_mpi_problem
Fix particle probability density mpi problem
Wolfgang Bangerth [Mon, 27 Jan 2020 22:17:05 +0000 (15:17 -0700)]
Merge pull request #9362 from peterrum/pft-order
New p:f:t tests
Daniel Arndt [Mon, 27 Jan 2020 22:06:54 +0000 (17:06 -0500)]
Merge pull request #9409 from bangerth/utilities
Update the documentation of int_to_string() and to_string().
grahambenharper [Mon, 27 Jan 2020 21:26:49 +0000 (14:26 -0700)]
Update documentation/implementation of some polynomial classes
grahambenharper [Mon, 27 Jan 2020 19:59:35 +0000 (12:59 -0700)]
Remove unused included file
Peter Munch [Sun, 26 Jan 2020 19:44:03 +0000 (20:44 +0100)]
Fix remaining issues for #9195
Peter Munch [Fri, 24 Jan 2020 15:36:04 +0000 (16:36 +0100)]
Fix ParameterHandler::read_xml_recursively for actions
Martin Kronbichler [Mon, 27 Jan 2020 12:06:59 +0000 (13:06 +0100)]
Merge pull request #9433 from masterleinad/fix-gcc-4.9.4
Fix gcc 4.9.4 warning
Martin Kronbichler [Mon, 27 Jan 2020 09:10:24 +0000 (10:10 +0100)]
Merge pull request #9388 from drwells/add-replicated-triangulation
Implement GridGenerator::replicate_triangulation().
Martin Kronbichler [Mon, 27 Jan 2020 08:54:28 +0000 (09:54 +0100)]
Merge pull request #9413 from bangerth/type-erasure
Add a note to two .h files about the design pattern used there.
Daniel Arndt [Mon, 27 Jan 2020 04:20:06 +0000 (23:20 -0500)]
Fix gcc 4.9.4 warning
Peter Munch [Fri, 17 Jan 2020 04:43:22 +0000 (05:43 +0100)]
Tests to ensure that the order of pft and be the base triangulations are the same
David Wells [Tue, 14 Jan 2020 04:21:45 +0000 (23:21 -0500)]
Implement GridGenerator::replicate_triangulation().
Alexander Grayver [Fri, 24 Jan 2020 10:23:14 +0000 (11:23 +0100)]
Add python wrappers for Quadrature
David Wells [Sun, 26 Jan 2020 04:51:38 +0000 (23:51 -0500)]
Merge pull request #9207 from bangerth/umfpack
Implement the solution of complex linear systems using UMFPACK.
Daniel Arndt [Sun, 26 Jan 2020 02:02:27 +0000 (21:02 -0500)]
Merge pull request #9419 from GrahamBenHarper/graham_dev_clean_fepoly
Remove seemingly unused code in fe_poly.cc
Daniel Arndt [Sun, 26 Jan 2020 02:00:20 +0000 (21:00 -0500)]
Merge pull request #9410 from bangerth/utilities-2
Use std::to_string() instead of boost lexical_cast.
Wolfgang Bangerth [Thu, 23 Jan 2020 01:37:07 +0000 (18:37 -0700)]
Selectively disable complex UMFPACK instantiations if DEAL_II_WITH_COMPLEX=OFF.
David Wells [Sat, 25 Jan 2020 21:13:11 +0000 (16:13 -0500)]
Merge pull request #9415 from bangerth/face_indices
Introduce GeometryInfo::face_indices()
Daniel Arndt [Sat, 25 Jan 2020 18:51:30 +0000 (13:51 -0500)]
Merge pull request #9421 from bangerth/error
Improve an error message.
MFraters [Sat, 25 Jan 2020 18:22:56 +0000 (10:22 -0800)]
Update source/particles/generators.cc
Co-Authored-By: Daniel Arndt <arndtd@ornl.gov>
Menno Fraters [Sat, 25 Jan 2020 08:24:39 +0000 (00:24 -0800)]
add test with 3 mpi processes and 4 particles.
Menno Fraters [Sat, 25 Jan 2020 08:24:32 +0000 (00:24 -0800)]
add test with 3 mpi processes and 3 particles.
Menno Fraters [Sat, 25 Jan 2020 08:24:23 +0000 (00:24 -0800)]
add test with 3 mpi processes and 2 particles.
Menno Fraters [Sat, 25 Jan 2020 08:23:47 +0000 (00:23 -0800)]
add test with 3 mpi processes and 1 particle.
Menno Fraters [Sat, 25 Jan 2020 05:52:33 +0000 (21:52 -0800)]
fix local_end_weight definition.
Daniel Arndt [Sat, 25 Jan 2020 05:52:23 +0000 (00:52 -0500)]
Merge pull request #9423 from krishnakumarg1984/step2_remove_unwanted_include
removes an unwanted include file manifold_lib.h from step-2
Daniel Arndt [Sat, 25 Jan 2020 04:57:57 +0000 (23:57 -0500)]
Add mailmap entry
Menno Fraters [Sat, 25 Jan 2020 02:39:20 +0000 (18:39 -0800)]
Fix particle probability density mpi problem
Wolfgang Bangerth [Fri, 24 Jan 2020 22:21:55 +0000 (15:21 -0700)]
Merge pull request #9414 from tjhei/step12-data_out
step-12: use add_data_vector with DoFHandler
Timo Heister [Wed, 22 Jan 2020 01:50:45 +0000 (20:50 -0500)]
step-12: use add_data_vector with DoFHandler
Otherwise data output breaks if you switch to DG(0) (cell vs dof
dataout).
Wolfgang Bangerth [Thu, 23 Jan 2020 17:46:38 +0000 (10:46 -0700)]
Merge pull request #9422 from masterleinad/restrict_fe_series_02
Restrict fe_series_02
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