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https://gitweb.dealii.org/ - dealii.git/log
Doug Shi-Dong [Wed, 1 Apr 2020 16:29:20 +0000 (12:29 -0400)]
Allow vector_adaptor to work on ghosted vectors.
Previous implementation did not work on ghosted vectors since it used
compress().
The test on ghosted vectors did not truly test for ghosted vectors
since it used the copy constructor of LA::distributed::Vector,
which does not fill the ghosted entries.
Daniel Arndt [Thu, 26 Mar 2020 14:31:02 +0000 (10:31 -0400)]
Merge pull request #9738 from peterrum/mf_util_fix
Fix MatrixFreeTools
Peter Munch [Thu, 26 Mar 2020 09:29:32 +0000 (10:29 +0100)]
Fix MatrixFreeTools
Daniel Arndt [Thu, 26 Mar 2020 04:58:46 +0000 (00:58 -0400)]
Merge pull request #9737 from gassmoeller/specify_unique_namespace
Uniquely specify namespace
Daniel Arndt [Thu, 26 Mar 2020 02:31:06 +0000 (22:31 -0400)]
Merge pull request #9731 from peterrum/mf_util
Introduce new namespace MatrixFreeTools
Wolfgang Bangerth [Thu, 26 Mar 2020 01:42:08 +0000 (02:42 +0100)]
Merge pull request #9735 from peterrum/dofhandler_n_locally_owned_dofs_return_type
Change return type of DoFHandler::n_locally_owned_dofs()
Rene Gassmoeller [Wed, 25 Mar 2020 23:36:49 +0000 (16:36 -0700)]
Uniquely specify namespace
Martin Kronbichler [Wed, 25 Mar 2020 22:07:32 +0000 (23:07 +0100)]
Merge pull request #9736 from masterleinad/replace_construction_data
Replace ConstructionData in documentation
Daniel Arndt [Wed, 25 Mar 2020 21:17:22 +0000 (17:17 -0400)]
Replace ConstructionData in documentation
Peter Munch [Wed, 25 Mar 2020 09:54:32 +0000 (10:54 +0100)]
Introduce new namespace MatrixFreeTools
Peter Munch [Wed, 25 Mar 2020 21:08:29 +0000 (22:08 +0100)]
Change return type of DoFHandler::n_locally_owned_dofs()
Martin Kronbichler [Wed, 25 Mar 2020 12:33:26 +0000 (13:33 +0100)]
Merge pull request #9725 from tjhei/deprecate_n_array_explain
annotate deprecation of n_array_elements
Timo Heister [Tue, 24 Mar 2020 15:03:33 +0000 (11:03 -0400)]
annotate deprecation of n_array_elements
We should always add a comment for a replacement when deprecating
something. It was not obvious here.
Follow-up to #9688
Martin Kronbichler [Wed, 25 Mar 2020 11:28:23 +0000 (12:28 +0100)]
Merge pull request #9730 from peterrum/nonconti_reserve
Fix reserve in NoncontiguousPartitioner
Peter Munch [Wed, 25 Mar 2020 07:23:37 +0000 (08:23 +0100)]
Fix reserve in NoncontiguousPartitioner
Martin Kronbichler [Wed, 25 Mar 2020 07:07:55 +0000 (08:07 +0100)]
Merge pull request #9645 from tjhei/precondition_chebyshev_report_eig
PreconditionChebyshev: report stats with output_details
Wolfgang Bangerth [Wed, 25 Mar 2020 04:10:26 +0000 (05:10 +0100)]
Merge pull request #9728 from rezarastak/tutorial_doc_fix
links in the tutorials page fixed
Reza Rastak [Wed, 25 Mar 2020 03:31:18 +0000 (20:31 -0700)]
links in the tutorials page fixed
Martin Kronbichler [Tue, 24 Mar 2020 16:46:54 +0000 (17:46 +0100)]
Merge pull request #9724 from tjhei/mpi_no_avoid_a_deadlock_error_text
MPI: silence "avoid a deadlock" error message
Martin Kronbichler [Tue, 24 Mar 2020 15:30:21 +0000 (16:30 +0100)]
Merge pull request #9715 from bangerth/doc
Minor additions to the documentation about higher order output.
Martin Kronbichler [Tue, 24 Mar 2020 15:29:51 +0000 (16:29 +0100)]
Merge pull request #9719 from peterrum/mf_tree_fix
Fix MatrixFree graph
Wolfgang Bangerth [Mon, 23 Mar 2020 02:23:59 +0000 (20:23 -0600)]
Minor additions to the documentation about higher order output.
Timo Heister [Tue, 24 Mar 2020 14:32:17 +0000 (10:32 -0400)]
MPI: silence "avoid a deadlock" error message
When an exception occurs (solver convergence, out of memory, etc..), we
end up printing an error message from every single MPI rank. I have
never used this information in practice and it produces a lot of
unnecessary noise. Even worse, it produces gigantic, useless log files
when running with 100k+ MPI ranks. Therefore, I proposed removing this
altogether.
Peter Munch [Mon, 23 Mar 2020 15:38:56 +0000 (16:38 +0100)]
Fix MatrixFree graph
Martin Kronbichler [Tue, 24 Mar 2020 06:17:38 +0000 (07:17 +0100)]
Merge pull request #9687 from bangerth/modules
Replace the connections graph with the one from the recent paper.
David Wells [Mon, 23 Mar 2020 23:37:26 +0000 (19:37 -0400)]
Merge pull request #9721 from bangerth/11
Make external file names use our usual naming scheme.
Wolfgang Bangerth [Mon, 23 Mar 2020 21:56:53 +0000 (15:56 -0600)]
Make external file names use our usual naming scheme.
Timo Heister [Mon, 23 Mar 2020 17:31:08 +0000 (13:31 -0400)]
changelog
Timo Heister [Mon, 23 Mar 2020 12:39:22 +0000 (08:39 -0400)]
address comments, add documentation
Wolfgang Bangerth [Fri, 20 Mar 2020 00:16:03 +0000 (18:16 -0600)]
Replace the connections graph with the one from the recent paper.
Martin Kronbichler [Mon, 23 Mar 2020 10:31:16 +0000 (11:31 +0100)]
Merge pull request #9716 from bangerth/nedelec-sz
Remove update_once/each() functions from FE_NedelecSZ.
Martin Kronbichler [Mon, 23 Mar 2020 10:30:56 +0000 (11:30 +0100)]
Merge pull request #9717 from peterrum/mf_tree
Add a graph to matrix-free module
Peter Munch [Mon, 23 Mar 2020 07:25:07 +0000 (08:25 +0100)]
Add a graph to matrix-free module
Martin Kronbichler [Mon, 23 Mar 2020 05:55:39 +0000 (06:55 +0100)]
Merge pull request #9714 from bangerth/11
Minor edits to step-11
Wolfgang Bangerth [Mon, 23 Mar 2020 02:36:48 +0000 (20:36 -0600)]
Remove update_once/each() functions from FE_NedelecSZ.
These functions *used* to be part of the public interfaces of FE classes, but haven't
in a long time. They also aren't 'virtual' any more for this class. Furthermore,
all uses of these functions are of the form 'update_once() | update_each()', so
we may as well just call the 'requires_update_flags()' function that is the
current interface.
Wolfgang Bangerth [Mon, 23 Mar 2020 02:19:03 +0000 (20:19 -0600)]
Improve wording.
Wolfgang Bangerth [Mon, 23 Mar 2020 02:17:32 +0000 (20:17 -0600)]
Simplify code a bit.
Wolfgang Bangerth [Mon, 23 Mar 2020 02:16:37 +0000 (03:16 +0100)]
Merge pull request #9694 from agrayver/update_step_11
Update step 11 with high-order mesh images
Wolfgang Bangerth [Mon, 23 Mar 2020 00:01:31 +0000 (01:01 +0100)]
Merge pull request #9713 from tjhei/tutorial_keywords
tutorials: add more keywords
Timo Heister [Sun, 22 Mar 2020 22:42:33 +0000 (18:42 -0400)]
braces
Martin Kronbichler [Sun, 22 Mar 2020 20:40:04 +0000 (21:40 +0100)]
Merge pull request #9709 from peterrum/vectorizedarray_nlanes
Name alias of VectorizedArray::size() consistently
Martin Kronbichler [Sun, 22 Mar 2020 20:39:15 +0000 (21:39 +0100)]
Merge pull request #8004 from luca-heltai/coupling-with-cutoff
Compute coupling mass matrices using cutoff functions.
Timo Heister [Sun, 22 Mar 2020 19:29:47 +0000 (15:29 -0400)]
tutorials: add more keywords
- add keywords to many tutorials
- fix two minor link issues
Matthias Maier [Sun, 22 Mar 2020 19:17:27 +0000 (14:17 -0500)]
Merge pull request #9711 from tjhei/ci_check_file_encoding
CI: check file encoding
Matthias Maier [Sun, 22 Mar 2020 18:32:40 +0000 (13:32 -0500)]
Merge pull request #9712 from kronbichler/fix_compilation_tpetra-2
Fix compilation with Tpetra vector, 2nd attempt
Matthias Maier [Sun, 22 Mar 2020 17:48:18 +0000 (12:48 -0500)]
Merge pull request #9696 from kronbichler/step-69-links
Link in step-69 on tutorial page
Matthias Maier [Sun, 22 Mar 2020 17:36:19 +0000 (12:36 -0500)]
Merge pull request #9706 from kronbichler/remove_a_few_n_array_elements
Remove a few VectorizedArray::n_array_elements
Martin Kronbichler [Sun, 22 Mar 2020 16:19:48 +0000 (17:19 +0100)]
Fix compilation with Tpetra vector, 2nd attempt
Timo Heister [Mon, 9 Mar 2020 21:29:35 +0000 (17:29 -0400)]
PreconditionChebyshev: report eigenvalue statistics
Timo Heister [Sun, 22 Mar 2020 14:47:30 +0000 (10:47 -0400)]
Merge pull request #9708 from kronbichler/fix_compilation_tpetra
Fix compilation with Tpetra vector
Timo Heister [Sun, 22 Mar 2020 14:38:31 +0000 (10:38 -0400)]
CI: check file encoding
closes #8076
Wenyu Lei [Mon, 6 May 2019 21:26:46 +0000 (23:26 +0200)]
Modify the function call in the test and applied the suggested changes.
Applied the suggested changes
Added a new line at the end of the inst.in file
remove the white space in the last line
Peter Munch [Sun, 22 Mar 2020 07:55:33 +0000 (08:55 +0100)]
Name alias of VectorizedArray::size() consistently
Martin Kronbichler [Sun, 22 Mar 2020 07:43:10 +0000 (08:43 +0100)]
Fix compilation with Tpetra vector
Alexander Grayver [Sat, 21 Mar 2020 07:38:14 +0000 (08:38 +0100)]
Add changelog
Martin Kronbichler [Sat, 21 Mar 2020 16:39:48 +0000 (17:39 +0100)]
Remove another VectorizedArray::n_array_elements
Martin Kronbichler [Sat, 21 Mar 2020 16:39:28 +0000 (17:39 +0100)]
Remove a few VectorizedArray::n_array_elements in examples
Martin Kronbichler [Sat, 21 Mar 2020 14:08:59 +0000 (15:08 +0100)]
Merge pull request #9688 from peterrum/vectorized_array_deprecate_n_array_elements
Deprecate VectorizedArray::n_array_elements
Martin Kronbichler [Sat, 21 Mar 2020 14:07:21 +0000 (15:07 +0100)]
Merge pull request #9701 from agrayver/add_wiki_link_step65
Add a wiki link for high-order visualization
Daniel Arndt [Sat, 21 Mar 2020 12:33:07 +0000 (08:33 -0400)]
Merge pull request #9693 from tjhei/muparser_warning_gcc9
remove bundled muparser gcc 9 warning
Alexander Grayver [Sat, 21 Mar 2020 07:43:03 +0000 (08:43 +0100)]
Add a wiki link
Alexander Grayver [Fri, 20 Mar 2020 18:57:42 +0000 (19:57 +0100)]
Add mesh images
Martin Kronbichler [Sat, 21 Mar 2020 06:31:38 +0000 (07:31 +0100)]
Merge pull request #9700 from bangerth/3-lines
Respect the 3-empty-lines rule.
Martin Kronbichler [Sat, 21 Mar 2020 06:31:05 +0000 (07:31 +0100)]
Merge pull request #9698 from bangerth/69
Fix a typo.
Martin Kronbichler [Sat, 21 Mar 2020 06:30:29 +0000 (07:30 +0100)]
Merge pull request #9697 from bangerth/20-2
Simplify the code a bit.
Martin Kronbichler [Sat, 21 Mar 2020 06:29:29 +0000 (07:29 +0100)]
Merge pull request #9699 from bangerth/51
Move table formatting code next to where the table is filled.
Wolfgang Bangerth [Sat, 21 Mar 2020 00:52:25 +0000 (01:52 +0100)]
Merge pull request #9692 from tjhei/bundled_tbb_gcc9_warn
bundled tbb warnings with gcc9
Wolfgang Bangerth [Sat, 21 Mar 2020 00:33:42 +0000 (18:33 -0600)]
Respect the 3-empty-lines rule.
Timo Heister [Sat, 21 Mar 2020 00:08:57 +0000 (20:08 -0400)]
remove constexpr
Wolfgang Bangerth [Fri, 20 Mar 2020 22:23:25 +0000 (16:23 -0600)]
Move table formatting code next to where the table is filled.
Wolfgang Bangerth [Fri, 20 Mar 2020 21:51:08 +0000 (15:51 -0600)]
Fix a typo.
The word 'born' without an 'e' at the end is exclusively used in connection with 'giving
birth'. In all other contexts, the past form of 'bear' is 'borne'.
Wolfgang Bangerth [Fri, 20 Mar 2020 21:48:54 +0000 (22:48 +0100)]
Merge pull request #9695 from kronbichler/step-69-typo
Fix a few typos in step-69
Wolfgang Bangerth [Fri, 20 Mar 2020 21:43:17 +0000 (15:43 -0600)]
Simplify the code a bit.
Also provide a better explanation of a '(void)var;' statement.
Peter Munch [Fri, 20 Mar 2020 08:54:37 +0000 (09:54 +0100)]
Deprecate n_array_elements and replace its usage
Martin Kronbichler [Fri, 20 Mar 2020 20:39:19 +0000 (21:39 +0100)]
Merge pull request #9691 from bangerth/20
Modularize step-20 better.
Martin Kronbichler [Fri, 20 Mar 2020 20:34:44 +0000 (21:34 +0100)]
Link in step-69 on tutorial page
Martin Kronbichler [Fri, 20 Mar 2020 20:27:11 +0000 (21:27 +0100)]
Fix a few typos in step-69
Timo Heister [Fri, 20 Mar 2020 19:00:31 +0000 (15:00 -0400)]
remove bundled muparser gcc 9 warning
I am not sure I understand if the default assignment operator does the
right thing here, but this avoids the warning and shouldn't change
functionality.
Timo Heister [Fri, 20 Mar 2020 18:56:06 +0000 (14:56 -0400)]
bundled tbb warnings with gcc9
I see a couple of strncpy warnings with gcc 9 in our bundled tbb.
Instead of trying to fix the code (it looks correct as it is wrapped in
an if to check the length), just disable the warning.
Wolfgang Bangerth [Fri, 20 Mar 2020 16:59:11 +0000 (10:59 -0600)]
Modularize step-20 better.
Wolfgang Bangerth [Fri, 20 Mar 2020 15:10:31 +0000 (16:10 +0100)]
Merge pull request #9686 from tamiko/tensor_cleanup
base/tensor.h - small cleanups
Martin Kronbichler [Fri, 20 Mar 2020 10:35:53 +0000 (11:35 +0100)]
Merge pull request #9681 from peterrum/vectorized_array_size_type
Change type of template argument width of VectorizedArray to std::size_t
Peter Munch [Thu, 19 Mar 2020 09:56:03 +0000 (10:56 +0100)]
Change type of template argument width of VectorizedArray to std::size_t
Daniel Arndt [Fri, 20 Mar 2020 04:24:23 +0000 (00:24 -0400)]
Merge pull request #9675 from peterrum/vectorized_array_advance
VectorizedArrayIterator enable std::advance()
Matthias Maier [Thu, 19 Mar 2020 23:44:00 +0000 (18:44 -0500)]
base/tensor.h add two static asserts
Take over Wolfgang's static_assert from pull request #9685
Co-authored-by: Wolfgang Bangerth <bangerth@colostate.edu>
Matthias Maier [Thu, 19 Mar 2020 23:37:27 +0000 (18:37 -0500)]
Revert "Bugfix: Allow compilation in C++98 mode"
This reverts commit
f61b1485f9d54066349239c83361db231f13c42e .
Matthias Maier [Thu, 19 Mar 2020 23:40:27 +0000 (18:40 -0500)]
base/tensor.h: remove redundant recursion step
Wolfgang Bangerth [Thu, 19 Mar 2020 19:21:50 +0000 (20:21 +0100)]
Merge pull request #9530 from simonsticko/correcting_derivatives_mapping_cartesian
Avoid correcting higher derivatives if mapping is Cartesian
Peter Munch [Wed, 18 Mar 2020 00:17:09 +0000 (01:17 +0100)]
VectorizedArrayIterator enable std::advance()
Daniel Arndt [Thu, 19 Mar 2020 18:31:23 +0000 (14:31 -0400)]
Merge pull request #9679 from masterleinad/default_copy_constructor_matrixblock
Default copy constructor for MatrixBlock
Wolfgang Bangerth [Thu, 19 Mar 2020 16:45:16 +0000 (17:45 +0100)]
Merge pull request #9676 from nfehn/initializer_vs_vector_2
merge_triangulations(): replace std::initializer_list by std::vector
Wolfgang Bangerth [Thu, 19 Mar 2020 16:41:01 +0000 (17:41 +0100)]
Merge pull request #9100 from tjhei/mg_data_out_clean
Multigrid DataOut
David Wells [Thu, 19 Mar 2020 13:38:31 +0000 (09:38 -0400)]
Merge pull request #9677 from tjhei/remove-step-19
remove step-19
Simon Sticko [Fri, 14 Feb 2020 13:38:13 +0000 (14:38 +0100)]
Avoid correcting higher derivatives if mapping is Cartesian.
Correcting the 3rd derivative with the derivatives of the Jacobian is
expensive. If the used mapping is Cartesian the derivatives of the
Jacobian will be zero and don't need to be corrected. Check if this is
the case before computing the correction terms.
Daniel Arndt [Thu, 19 Mar 2020 02:01:08 +0000 (22:01 -0400)]
Merge pull request #9678 from tjhei/constexpr_cxx14_rename
rename _HAVE_CXX14_CONSTEXPR_CAN_CALL_NONCONSTEXPR
Daniel Arndt [Wed, 18 Mar 2020 22:55:28 +0000 (18:55 -0400)]
Default copy constructor for MatrixBlock
Timo Heister [Wed, 18 Mar 2020 20:35:22 +0000 (16:35 -0400)]
rename _HAVE_CXX14_CONSTEXPR_CAN_CALL_NONCONSTEXPR
Rename DEAL_II_HAVE_CXX14_CONSTEXPR_CAN_CALL_NONCONSTEXPR to
DEAL_II_HAVE_CXX14_CONSTEXPR as it better expresses the meaning.
Martin Kronbichler [Wed, 18 Mar 2020 20:12:25 +0000 (21:12 +0100)]
Merge pull request #9639 from peterrum/nonconti_padding
Enable Utilities::MPI::NoncontiguousPartitioner to handle padding
Timo Heister [Wed, 18 Mar 2020 13:45:19 +0000 (09:45 -0400)]
remove step-19
closes #2046
Timo Heister [Wed, 18 Mar 2020 15:32:49 +0000 (11:32 -0400)]
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