]>
https://gitweb.dealii.org/ - dealii-svn.git/log
bangerth [Mon, 7 Jan 2013 14:15:01 +0000 (14:15 +0000)]
Rename an argument to a function to make its intent clearer.
git-svn-id: https://svn.dealii.org/trunk@27958
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bangerth [Mon, 7 Jan 2013 14:14:40 +0000 (14:14 +0000)]
Fix another case where a conversion to non-deprecated functions went wrong.
git-svn-id: https://svn.dealii.org/trunk@27957
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bangerth [Mon, 7 Jan 2013 04:35:12 +0000 (04:35 +0000)]
Avoid use of SparseMatrix::global_entry in one more place. Many more to come.
git-svn-id: https://svn.dealii.org/trunk@27956
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bangerth [Mon, 7 Jan 2013 04:34:50 +0000 (04:34 +0000)]
Add a bunch of functions to the iterator class.
git-svn-id: https://svn.dealii.org/trunk@27955
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bangerth [Mon, 7 Jan 2013 03:31:19 +0000 (03:31 +0000)]
Remove a few stray semicolons.
git-svn-id: https://svn.dealii.org/trunk@27954
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bangerth [Mon, 7 Jan 2013 03:30:43 +0000 (03:30 +0000)]
Fix an incorrect conversion to avoid a deprecated function.
git-svn-id: https://svn.dealii.org/trunk@27953
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bangerth [Mon, 7 Jan 2013 03:07:02 +0000 (03:07 +0000)]
Avoid use of deprecated function.
git-svn-id: https://svn.dealii.org/trunk@27952
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bangerth [Mon, 7 Jan 2013 01:13:37 +0000 (01:13 +0000)]
More avoidance of deprecated things.
git-svn-id: https://svn.dealii.org/trunk@27951
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bangerth [Mon, 7 Jan 2013 01:11:18 +0000 (01:11 +0000)]
Avoid use of deprecated numbers.
git-svn-id: https://svn.dealii.org/trunk@27950
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bangerth [Mon, 7 Jan 2013 01:06:51 +0000 (01:06 +0000)]
Fix an assertion that was incorrectly changed when converting deprecated
function calls.
git-svn-id: https://svn.dealii.org/trunk@27949
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bangerth [Sun, 6 Jan 2013 03:17:12 +0000 (03:17 +0000)]
Reintegrate branch_deprecated.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27947
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bangerth [Sun, 6 Jan 2013 02:23:08 +0000 (02:23 +0000)]
Merge from mainline.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27946
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bangerth [Sun, 6 Jan 2013 02:13:43 +0000 (02:13 +0000)]
Discuss deprecation notices.
git-svn-id: https://svn.dealii.org/trunk@27945
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bangerth [Sun, 6 Jan 2013 02:06:04 +0000 (02:06 +0000)]
Merge from mainline.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27944
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bangerth [Sun, 6 Jan 2013 02:03:23 +0000 (02:03 +0000)]
Rewrite entry in a bit more detail.
git-svn-id: https://svn.dealii.org/trunk@27943
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bangerth [Sun, 6 Jan 2013 01:55:02 +0000 (01:55 +0000)]
Merge the changes made to the sources on the branch_deprecated branch. This introduces a lot of places where we get warnings right now. In an ideal world, these would have been fixed on the branch. However, and unfortunately, the branch_deprecated is off branch_cmake, neither of which can currently be tested on the regression tester machine. Consequently, it is difficult to do incremental changes on the branch because one doesn't get to see the effects of these changes in the tests. It may just be a way to get the warnings fixed sooner, rather than later.
git-svn-id: https://svn.dealii.org/trunk@27942
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bangerth [Sun, 6 Jan 2013 01:41:33 +0000 (01:41 +0000)]
Apply forgotten patch.
git-svn-id: https://svn.dealii.org/trunk@27941
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bangerth [Sun, 6 Jan 2013 00:24:29 +0000 (00:24 +0000)]
Remove now redundant include file.
git-svn-id: https://svn.dealii.org/trunk@27940
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bangerth [Sun, 6 Jan 2013 00:21:28 +0000 (00:21 +0000)]
Adjust after merge.
git-svn-id: https://svn.dealii.org/trunk@27939
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bangerth [Sat, 5 Jan 2013 23:10:50 +0000 (23:10 +0000)]
Update.
git-svn-id: https://svn.dealii.org/trunk@27936
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bangerth [Sat, 5 Jan 2013 13:36:35 +0000 (13:36 +0000)]
Fix branch marker.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27935
0785d39b -7218-0410-832d-
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bangerth [Sat, 5 Jan 2013 13:35:26 +0000 (13:35 +0000)]
Remove branch marker again.
git-svn-id: https://svn.dealii.org/trunk@27933
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bangerth [Sat, 5 Jan 2013 12:12:49 +0000 (12:12 +0000)]
Avoid deprecated types and variables.
git-svn-id: https://svn.dealii.org/trunk@27932
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bangerth [Sat, 5 Jan 2013 12:12:16 +0000 (12:12 +0000)]
Extend Utilities::int_to_string to up to 10 digits.
git-svn-id: https://svn.dealii.org/trunk@27931
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bangerth [Sat, 5 Jan 2013 04:40:58 +0000 (04:40 +0000)]
Merge from upstream.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27930
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bangerth [Sat, 5 Jan 2013 04:08:45 +0000 (04:08 +0000)]
Re-order source directories.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27929
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bangerth [Sat, 5 Jan 2013 04:07:33 +0000 (04:07 +0000)]
Merge from mainline.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27928
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heister [Fri, 4 Jan 2013 21:54:31 +0000 (21:54 +0000)]
update Makefile for step-50 to disable compilation if Trilinos or p4est is missing
git-svn-id: https://svn.dealii.org/trunk@27926
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heister [Fri, 4 Jan 2013 16:34:08 +0000 (16:34 +0000)]
leave todo
git-svn-id: https://svn.dealii.org/trunk@27923
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heister [Fri, 4 Jan 2013 16:14:09 +0000 (16:14 +0000)]
remove references to mg_dof_accessor.h
git-svn-id: https://svn.dealii.org/trunk@27922
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heister [Fri, 4 Jan 2013 16:12:34 +0000 (16:12 +0000)]
mark mg_dof_accessor.h deprecated and remove it everywhere
git-svn-id: https://svn.dealii.org/trunk@27921
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kronbichler [Fri, 4 Jan 2013 14:20:45 +0000 (14:20 +0000)]
Force reconfigure also when template arguments or dealii templates change.
git-svn-id: https://svn.dealii.org/trunk@27920
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kronbichler [Fri, 4 Jan 2013 10:10:48 +0000 (10:10 +0000)]
Delete MGDoFHandler from matrix free class. These features are now present in DoFHandler.
git-svn-id: https://svn.dealii.org/trunk@27919
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kronbichler [Fri, 4 Jan 2013 08:16:04 +0000 (08:16 +0000)]
Silence warning.
git-svn-id: https://svn.dealii.org/trunk@27918
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kronbichler [Fri, 4 Jan 2013 08:11:46 +0000 (08:11 +0000)]
Ensure compilation without p4est.
git-svn-id: https://svn.dealii.org/trunk@27917
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kronbichler [Fri, 4 Jan 2013 08:05:24 +0000 (08:05 +0000)]
Fix compilation
git-svn-id: https://svn.dealii.org/trunk@27916
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heister [Thu, 3 Jan 2013 21:43:00 +0000 (21:43 +0000)]
update changes.h: MGDoFHandler is deprecated
git-svn-id: https://svn.dealii.org/trunk@27913
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heister [Thu, 3 Jan 2013 21:37:23 +0000 (21:37 +0000)]
reintegrate branch merge_mg_into_dof_handler
git-svn-id: https://svn.dealii.org/trunk@27912
0785d39b -7218-0410-832d-
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bangerth [Wed, 2 Jan 2013 18:52:06 +0000 (18:52 +0000)]
Update link to the new changelogs (websvn).
git-svn-id: https://svn.dealii.org/trunk@27906
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heister [Wed, 2 Jan 2013 18:50:55 +0000 (18:50 +0000)]
add trilinos 11.0.3 as supported
git-svn-id: https://svn.dealii.org/trunk@27905
0785d39b -7218-0410-832d-
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bangerth [Wed, 2 Jan 2013 18:50:40 +0000 (18:50 +0000)]
Update link to the new changelogs (websvn).
git-svn-id: https://svn.dealii.org/trunk@27904
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kronbichler [Wed, 2 Jan 2013 17:03:38 +0000 (17:03 +0000)]
Remove unnecessary line.
git-svn-id: https://svn.dealii.org/trunk@27899
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bangerth [Wed, 2 Jan 2013 17:03:23 +0000 (17:03 +0000)]
Patch by Fahad Alrashed: Add a possibly different PETSc Viewer object to PETScWrappers::MatrixBase::write_ascii().
git-svn-id: https://svn.dealii.org/trunk@27898
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bangerth [Wed, 2 Jan 2013 16:59:56 +0000 (16:59 +0000)]
Patch by Fahad Alrashed: Overload PETScWrappers::MPI::Vector::print to make sure the right thing happens in parallel.
git-svn-id: https://svn.dealii.org/trunk@27897
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bangerth [Wed, 2 Jan 2013 16:54:31 +0000 (16:54 +0000)]
Patch by Fahad Alrashed: Add PETScWrappers::VectorBase::write_ascii.
git-svn-id: https://svn.dealii.org/trunk@27896
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maier [Wed, 2 Jan 2013 13:17:58 +0000 (13:17 +0000)]
Some cleanup in the compiler flags setup
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27893
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maier [Wed, 2 Jan 2013 12:26:37 +0000 (12:26 +0000)]
Merge branch 'branch_cmake' into branch_deprecated
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27892
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maier [Wed, 2 Jan 2013 12:15:45 +0000 (12:15 +0000)]
Compile the functionparser target without -Wall -pedantic
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27891
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bangerth [Mon, 31 Dec 2012 23:15:23 +0000 (23:15 +0000)]
Merge from mainline.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27890
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bangerth [Mon, 31 Dec 2012 23:13:33 +0000 (23:13 +0000)]
Avoid use of a deprecated function by introducing a private function with the same functionality and giving only select classes access to it.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27889
0785d39b -7218-0410-832d-
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bangerth [Mon, 31 Dec 2012 22:46:10 +0000 (22:46 +0000)]
Avoid use of a deprecated function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27888
0785d39b -7218-0410-832d-
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bangerth [Mon, 31 Dec 2012 22:43:01 +0000 (22:43 +0000)]
Avoid use of a deprecated function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27887
0785d39b -7218-0410-832d-
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bangerth [Mon, 31 Dec 2012 21:45:52 +0000 (21:45 +0000)]
Avoid use of the deprecated Table::data() function by making use of the fact that FullMatrix and LapackFullMatrix are derived from Table and are therefore able to access the (protected) member variable that stores the actual data.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27886
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maier [Mon, 31 Dec 2012 11:13:45 +0000 (11:13 +0000)]
Merge branch 'branch_cmake' into branch_deprecated
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27885
0785d39b -7218-0410-832d-
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maier [Mon, 31 Dec 2012 11:12:46 +0000 (11:12 +0000)]
Silence some warnings
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27884
0785d39b -7218-0410-832d-
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bangerth [Mon, 31 Dec 2012 04:47:37 +0000 (04:47 +0000)]
Simplify one function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27883
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bangerth [Mon, 31 Dec 2012 02:25:02 +0000 (02:25 +0000)]
Make compile.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27882
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bangerth [Mon, 31 Dec 2012 02:23:25 +0000 (02:23 +0000)]
Avoid one use of SparseMatrix::global_entry in favor of using iterators.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27881
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bangerth [Mon, 31 Dec 2012 02:22:23 +0000 (02:22 +0000)]
Make compile.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27880
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bangerth [Mon, 31 Dec 2012 01:03:37 +0000 (01:03 +0000)]
Do not worry too much about the 1d case -- everything is cheap there. Conserve
some memory also in the MG case and thereby resolve a TODO.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27879
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bangerth [Mon, 31 Dec 2012 00:58:50 +0000 (00:58 +0000)]
Do not worry too much about the 1d case -- everything is cheap there.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27878
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bangerth [Mon, 31 Dec 2012 00:55:14 +0000 (00:55 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@27877
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bangerth [Mon, 31 Dec 2012 00:14:38 +0000 (00:14 +0000)]
Undeprecate a couple of functions.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27876
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bangerth [Sun, 30 Dec 2012 02:24:10 +0000 (02:24 +0000)]
Un-deprecate a function.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27875
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bangerth [Sun, 30 Dec 2012 02:23:05 +0000 (02:23 +0000)]
Fix more typos.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27874
0785d39b -7218-0410-832d-
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bangerth [Sun, 30 Dec 2012 02:15:52 +0000 (02:15 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27873
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bangerth [Sun, 30 Dec 2012 02:13:10 +0000 (02:13 +0000)]
Improve documentation.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27872
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bangerth [Sun, 30 Dec 2012 02:09:20 +0000 (02:09 +0000)]
Un-deprecated a function and explain alternatives when appropriate.
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27871
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bangerth [Sun, 30 Dec 2012 01:27:45 +0000 (01:27 +0000)]
Improve wording of error message.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27870
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maier [Sat, 29 Dec 2012 21:10:56 +0000 (21:10 +0000)]
Some more cleanup
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27869
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maier [Fri, 28 Dec 2012 23:23:22 +0000 (23:23 +0000)]
Bugfix: Fix a copy and paste typo
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27868
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maier [Fri, 28 Dec 2012 23:16:56 +0000 (23:16 +0000)]
Some more cleanup
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27867
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maier [Fri, 28 Dec 2012 22:41:20 +0000 (22:41 +0000)]
Merge from branch_cmake
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27866
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kronbichler [Fri, 28 Dec 2012 10:41:54 +0000 (10:41 +0000)]
Fix a few out-of-bound array accesses. Refill some comments.
git-svn-id: https://svn.dealii.org/trunk@27865
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kronbichler [Fri, 28 Dec 2012 09:09:27 +0000 (09:09 +0000)]
Fix iterator types.
git-svn-id: https://svn.dealii.org/trunk@27864
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maier [Fri, 28 Dec 2012 08:43:14 +0000 (08:43 +0000)]
Merge from Mainline
Conflicts:
deal.II/Makefile
deal.II/common/Make.global_options.in
deal.II/doc/external-libs/mumps.html
deal.II/include/deal.II/lac/block_indices.h
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27863
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kronbichler [Fri, 28 Dec 2012 08:16:20 +0000 (08:16 +0000)]
The std::map that stored pointers to Jacobians could lead to a situation where the pointers became invalid. Store the actual data in the map now.
git-svn-id: https://svn.dealii.org/trunk@27862
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kronbichler [Thu, 27 Dec 2012 16:41:06 +0000 (16:41 +0000)]
Two more MPI_Allreduce commands that should not be called when using a single processor.
git-svn-id: https://svn.dealii.org/trunk@27861
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kronbichler [Thu, 27 Dec 2012 14:26:22 +0000 (14:26 +0000)]
Adjust output.
git-svn-id: https://svn.dealii.org/trunk@27860
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kronbichler [Thu, 27 Dec 2012 14:15:04 +0000 (14:15 +0000)]
Avoid calls to MPI_Allreduce for vectors where only one processor participates.
git-svn-id: https://svn.dealii.org/trunk@27859
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kronbichler [Thu, 27 Dec 2012 13:12:28 +0000 (13:12 +0000)]
Avoid compiler warning.
git-svn-id: https://svn.dealii.org/trunk@27858
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bangerth [Thu, 27 Dec 2012 01:50:21 +0000 (01:50 +0000)]
Hm, that doesn't work. Try std::fpclassify instead.
git-svn-id: https://svn.dealii.org/trunk@27857
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bangerth [Wed, 26 Dec 2012 20:18:04 +0000 (20:18 +0000)]
Fix another one.
git-svn-id: https://svn.dealii.org/trunk@27856
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bangerth [Wed, 26 Dec 2012 20:17:45 +0000 (20:17 +0000)]
Fix typos.
git-svn-id: https://svn.dealii.org/trunk@27855
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bangerth [Tue, 25 Dec 2012 15:05:57 +0000 (15:05 +0000)]
Avoid an ambiguity between ::fpclassify and std::fpclassify with recent Intel compilers.
git-svn-id: https://svn.dealii.org/trunk@27854
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bangerth [Tue, 25 Dec 2012 14:57:35 +0000 (14:57 +0000)]
Fix an issue with the Intel compiler (reported by Ted Kord).
git-svn-id: https://svn.dealii.org/trunk@27853
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kanschat [Fri, 21 Dec 2012 15:24:03 +0000 (15:24 +0000)]
identify branch on new server
git-svn-id: https://svn.dealii.org/trunk@27851
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kronbichler [Fri, 21 Dec 2012 14:15:12 +0000 (14:15 +0000)]
Simplify construction of dof connectivity graph by using deal.II data structures. Those are a little slower, but much more reliable and concise.
git-svn-id: https://svn.dealii.org/trunk@27850
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heister [Fri, 21 Dec 2012 02:51:02 +0000 (02:51 +0000)]
make indent
git-svn-id: https://svn.dealii.org/trunk@27847
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heister [Fri, 21 Dec 2012 02:47:21 +0000 (02:47 +0000)]
call indent for each file separately in the hope that this fixes some strange indentation inconsistencies
git-svn-id: https://svn.dealii.org/trunk@27846
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kronbichler [Wed, 19 Dec 2012 11:34:13 +0000 (11:34 +0000)]
Explicitly instantiate some internal structs to ensure these are always generated.
git-svn-id: https://svn.dealii.org/trunk@27827
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kronbichler [Wed, 19 Dec 2012 11:07:02 +0000 (11:07 +0000)]
Use generic instantiation procedure for selecting vectors in solution transfer.
git-svn-id: https://svn.dealii.org/trunk@27826
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kronbichler [Mon, 17 Dec 2012 09:22:26 +0000 (09:22 +0000)]
Matrix-vector product with deal.II vectors and Trilinos matrix are can be readily performed.
git-svn-id: https://svn.dealii.org/trunk@27825
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bangerth [Fri, 14 Dec 2012 12:15:55 +0000 (12:15 +0000)]
Break the instructions for PETSc and Trilinos into separate files.
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27824
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kronbichler [Fri, 14 Dec 2012 12:13:31 +0000 (12:13 +0000)]
Add one more access function. Reindent comments.
git-svn-id: https://svn.dealii.org/trunk@27823
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maier [Fri, 14 Dec 2012 10:10:47 +0000 (10:10 +0000)]
Merge from Mainline
git-svn-id: https://svn.dealii.org/branches/branch_cmake@27822
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bangerth [Fri, 14 Dec 2012 02:41:42 +0000 (02:41 +0000)]
Augment a comment.
git-svn-id: https://svn.dealii.org/trunk@27821
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bangerth [Fri, 14 Dec 2012 02:30:13 +0000 (02:30 +0000)]
Augment documentation some more.
git-svn-id: https://svn.dealii.org/trunk@27820
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heister [Thu, 13 Dec 2012 23:30:31 +0000 (23:30 +0000)]
merge from mainline
git-svn-id: https://svn.dealii.org/branches/branch_unify_linear_algebra@27817
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maier [Thu, 13 Dec 2012 17:59:25 +0000 (17:59 +0000)]
Avoid face_to_equivalent_cell_index
git-svn-id: https://svn.dealii.org/branches/branch_deprecated@27812
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