]>
https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Tue, 10 Jan 2023 04:00:17 +0000 (21:00 -0700)]
Rename functions to better reflect their functionality.
Wolfgang Bangerth [Tue, 10 Jan 2023 03:53:00 +0000 (20:53 -0700)]
Minor code cleanups in connectivity.h.
Wolfgang Bangerth [Tue, 10 Jan 2023 00:43:36 +0000 (17:43 -0700)]
Avoid a deprecated function in the last context where it is used.
Wolfgang Bangerth [Wed, 11 Jan 2023 01:42:08 +0000 (18:42 -0700)]
Centralize translation between deal.II and VTK numbering for pyramids.
David Wells [Thu, 12 Jan 2023 21:32:49 +0000 (16:32 -0500)]
Merge pull request #14664 from bangerth/ref-cell-deprecate
Deprecate functions in ReferenceCell and introduce replacements.
David Wells [Thu, 12 Jan 2023 21:25:19 +0000 (16:25 -0500)]
Merge pull request #14672 from bangerth/doc-88
Augment documentation of the PETSc block sparse matrix.
David Wells [Thu, 12 Jan 2023 21:00:05 +0000 (16:00 -0500)]
Merge pull request #14673 from nlsmrg/grid-generator-fix
Replace ucd_to_deal with a local vertex numbering in GridGenerator
Timo Heister [Thu, 12 Jan 2023 20:03:10 +0000 (15:03 -0500)]
Merge pull request #14670 from bangerth/contains-point
Implement ReferenceCell::contains_points() for the remaining reference cells.
Wolfgang Bangerth [Thu, 12 Jan 2023 15:59:09 +0000 (08:59 -0700)]
Use platform independent random numbers.
Nils Margenberg [Thu, 12 Jan 2023 15:47:25 +0000 (16:47 +0100)]
Replace ucd_to_deal with a local vertex numbering in GridGenerator
Daniel Arndt [Thu, 12 Jan 2023 13:31:48 +0000 (08:31 -0500)]
Merge pull request #14650 from masterleinad/guard_boost_intel_llvm
Daniel Arndt [Thu, 12 Jan 2023 03:46:35 +0000 (22:46 -0500)]
Merge pull request #14669 from drwells/barycentric-cleanup
Daniel Arndt [Thu, 12 Jan 2023 03:42:35 +0000 (22:42 -0500)]
Also export additional variables to dea.IIConfig.cmake
Co-authored-by: Matthias Maier <tamiko@43-1.org>
Daniel Arndt [Thu, 12 Jan 2023 03:13:46 +0000 (22:13 -0500)]
define preprocessor variables for all DEAL_II_FEATURE_*_BUNDLED_CONFIGURED CMake variables
Wolfgang Bangerth [Wed, 11 Jan 2023 23:59:34 +0000 (16:59 -0700)]
Use a conditional to avoid accesses the compiler flags as possibly out of bounds.
Marc Fehling [Wed, 11 Jan 2023 23:21:56 +0000 (16:21 -0700)]
Merge pull request #14663 from bangerth/assert-vtu
Make special casing in VTU output more explicit.
Marc Fehling [Wed, 11 Jan 2023 23:20:55 +0000 (16:20 -0700)]
Merge pull request #14666 from bangerth/doc-87
Minor updates to bounding box documentation.
Marc Fehling [Wed, 11 Jan 2023 23:20:30 +0000 (16:20 -0700)]
Merge pull request #14668 from bangerth/cleanup
Fix the name of a variable: 'ratio' instead of 'ration'.
Marc Fehling [Wed, 11 Jan 2023 23:20:11 +0000 (16:20 -0700)]
Merge pull request #14665 from bangerth/comments
Remove comments that are no longer useful.
David Wells [Sat, 17 Dec 2022 00:21:07 +0000 (19:21 -0500)]
BarycentricPolynomials: clean up implementation.
David Wells [Sat, 17 Dec 2022 00:19:01 +0000 (19:19 -0500)]
ReferenceCell: port line_to_cell_vertices() over
Wolfgang Bangerth [Wed, 11 Jan 2023 21:18:32 +0000 (14:18 -0700)]
Augment documentation of the PETSc block sparse matrix.
Wolfgang Bangerth [Wed, 11 Jan 2023 17:54:41 +0000 (10:54 -0700)]
Minor updates to bounding box documentation.
Daniel Arndt [Wed, 11 Jan 2023 20:03:48 +0000 (20:03 +0000)]
Fix OpenMP flag for Kokkos >= 4.0.00
Wolfgang Bangerth [Wed, 11 Jan 2023 19:07:33 +0000 (12:07 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Wed, 11 Jan 2023 19:06:27 +0000 (12:06 -0700)]
Add a test.
Wolfgang Bangerth [Wed, 11 Jan 2023 19:05:36 +0000 (12:05 -0700)]
Implement ReferenceCell::contains_points() for the remaining reference cells.
Wolfgang Bangerth [Wed, 11 Jan 2023 18:38:37 +0000 (11:38 -0700)]
Fix the name of a variable: 'ratio' instead of 'ration'.
While there, also make a variable 'const'.
Wolfgang Bangerth [Wed, 11 Jan 2023 17:36:02 +0000 (10:36 -0700)]
Remove comments that are no longer useful.
Daniel Arndt [Wed, 11 Jan 2023 16:57:18 +0000 (11:57 -0500)]
Prefix FEATURE_*_BUNDLED_CONFIGURED with DEAL_II
Daniel Arndt [Wed, 11 Jan 2023 13:49:43 +0000 (08:49 -0500)]
Rename preprocessor variable to DEAL_II_WITH_BOOST_BUNDLED
Wolfgang Bangerth [Tue, 10 Jan 2023 00:35:30 +0000 (17:35 -0700)]
Avoid a deprecated function.
Wolfgang Bangerth [Mon, 9 Jan 2023 23:56:11 +0000 (16:56 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Mon, 9 Jan 2023 22:30:51 +0000 (15:30 -0700)]
Deprecate functions in ReferenceCell and introduce replacements.
Wolfgang Bangerth [Wed, 11 Jan 2023 00:52:15 +0000 (17:52 -0700)]
Merge pull request #14662 from drwells/connectivity-orientation-class
Use TriaObjectsOrientations in connectivity.h.
Daniel Arndt [Tue, 10 Jan 2023 23:56:06 +0000 (23:56 +0000)]
Add comments ans provide fallback implementation
Daniel Arndt [Tue, 10 Jan 2023 23:19:33 +0000 (23:19 +0000)]
Guard for clang>=16 instead of IntelLLVM
Daniel Arndt [Tue, 10 Jan 2023 21:54:49 +0000 (16:54 -0500)]
Merge pull request #14660 from bangerth/array
Daniel Arndt [Tue, 10 Jan 2023 21:54:31 +0000 (16:54 -0500)]
Merge pull request #14659 from bangerth/vtu-1
Daniel Arndt [Tue, 10 Jan 2023 17:36:15 +0000 (12:36 -0500)]
Merge pull request #14654 from bangerth/array-view
Daniel Arndt [Tue, 10 Jan 2023 17:35:39 +0000 (12:35 -0500)]
Merge pull request #14658 from bangerth/vtu-2
Wolfgang Bangerth [Tue, 10 Jan 2023 17:30:16 +0000 (10:30 -0700)]
Make special casing in VTU output more explicit.
This also allows adding an assertion for the non-special case.
Daniel Arndt [Tue, 10 Jan 2023 17:25:56 +0000 (17:25 +0000)]
Cherry-pick fix into bundled boost
David Wells [Tue, 10 Jan 2023 17:25:23 +0000 (12:25 -0500)]
Use TriaObjectsOrientations in connectivity.h.
Daniel Arndt [Tue, 10 Jan 2023 17:11:48 +0000 (17:11 +0000)]
Add comment for the commit fixing the issue
Wolfgang Bangerth [Tue, 10 Jan 2023 17:03:09 +0000 (10:03 -0700)]
Test output of a simplex cell with n_subdivisions=2.
Wolfgang Bangerth [Tue, 10 Jan 2023 17:01:50 +0000 (10:01 -0700)]
Use std::array instead of a C-style array.
Wolfgang Bangerth [Tue, 10 Jan 2023 15:52:28 +0000 (08:52 -0700)]
Augment documentation of DataOutBase::Patch.
Wolfgang Bangerth [Tue, 10 Jan 2023 15:51:53 +0000 (08:51 -0700)]
Do not write gratuitous output files into test directories.
I don't think we still need those. If someone needs to look at this test in detail
again at a future time, it's easy enough to add these lines again by hand.
Daniel Arndt [Tue, 10 Jan 2023 14:29:31 +0000 (09:29 -0500)]
Remove Jenkinsfile.tidy
Daniel Arndt [Tue, 10 Jan 2023 13:38:10 +0000 (08:38 -0500)]
Merge pull request #14653 from bangerth/ref-99
Daniel Arndt [Tue, 10 Jan 2023 13:31:52 +0000 (08:31 -0500)]
Merge pull request #14655 from bangerth/av-2
Daniel Arndt [Tue, 10 Jan 2023 12:27:45 +0000 (07:27 -0500)]
Fix some more
Wolfgang Bangerth [Tue, 10 Jan 2023 04:23:47 +0000 (21:23 -0700)]
Merge pull request #14610 from CodyGirl/lapack-documentation
doc: add documentation for lapack library linking support
Wolfgang Bangerth [Tue, 10 Jan 2023 04:14:05 +0000 (21:14 -0700)]
Improve grammar in error messages.
Wolfgang Bangerth [Tue, 10 Jan 2023 04:13:24 +0000 (21:13 -0700)]
Add new test.
Wolfgang Bangerth [Tue, 10 Jan 2023 04:10:45 +0000 (21:10 -0700)]
Provide overloads of make_array_view() for std::array.
Wolfgang Bangerth [Tue, 10 Jan 2023 00:16:57 +0000 (17:16 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Mon, 9 Jan 2023 20:59:15 +0000 (13:59 -0700)]
Add to the documentation of ArrayView.
Wolfgang Bangerth [Mon, 9 Jan 2023 22:24:50 +0000 (15:24 -0700)]
Get rid of a template argument on an exception.
Daniel Arndt [Tue, 10 Jan 2023 04:00:59 +0000 (23:00 -0500)]
Merge pull request #14651 from drwells/unhardcode-6s
Daniel Arndt [Tue, 10 Jan 2023 03:55:44 +0000 (22:55 -0500)]
Fix a couple complaints
Marc Fehling [Tue, 20 Dec 2022 21:03:30 +0000 (14:03 -0700)]
Added partitioner reinit to LA::distributed::BlockVector().
Daniel Arndt [Sun, 8 Jan 2023 18:26:56 +0000 (13:26 -0500)]
Run clang-tidy in GitHub CI
David Wells [Mon, 9 Jan 2023 23:33:36 +0000 (18:33 -0500)]
Merge pull request #14649 from masterleinad/update_clang_tidy
Update clang-tidy checks for recent clang versions
David Wells [Mon, 9 Jan 2023 22:57:36 +0000 (17:57 -0500)]
un-hardcode some 6s.
This makes it clear that we want to use the maximum number of faces in 3D.
Martin Kronbichler [Mon, 9 Jan 2023 22:06:38 +0000 (23:06 +0100)]
Merge pull request #14647 from drwells/remove-begin-raw
Avoid using Tensor::begin_raw() et al.
Peter Munch [Mon, 9 Jan 2023 21:54:05 +0000 (22:54 +0100)]
Merge pull request #14604 from drwells/refactor-orientation
Add a dedicated class for orientation information.
Daniel Arndt [Mon, 9 Jan 2023 20:10:55 +0000 (20:10 +0000)]
Guard Boost compilation error with IntelLLVM
Daniel Arndt [Mon, 9 Jan 2023 18:15:51 +0000 (13:15 -0500)]
Remove cppcoreguidelines-pro-type-cstyle-cast
Daniel Arndt [Mon, 9 Jan 2023 18:15:19 +0000 (13:15 -0500)]
Revert "Cast MPI_STATUS[ES]_IGNORE"
This reverts commit
0ef0138a68f82cbf1ce759e1b5aaa38a2519df31 .
Daniel Arndt [Mon, 9 Jan 2023 18:00:27 +0000 (13:00 -0500)]
Cast MPI_STATUS[ES]_IGNORE
Daniel Arndt [Mon, 9 Jan 2023 16:35:10 +0000 (11:35 -0500)]
Update source/lac/sparsity_tools.cc
Co-authored-by: David Wells <drwells@email.unc.edu>
Daniel Arndt [Mon, 9 Jan 2023 14:45:16 +0000 (09:45 -0500)]
Update clang-tidy checks for recent clang versions
Luca Heltai [Mon, 9 Jan 2023 12:19:10 +0000 (13:19 +0100)]
Merge pull request #14594 from jppelteret/scratch_data_interfaces_01
Extend ScratchData to support hp for interfaces
David Wells [Sun, 8 Jan 2023 00:17:36 +0000 (19:17 -0500)]
Avoid using Tensor::begin_raw() et al.
These are deprecated and in several cases we have better choices anyway.
David Wells [Wed, 21 Dec 2022 19:11:28 +0000 (14:11 -0500)]
Add a dedicated class for orientation information.
Daniel Arndt [Sat, 7 Jan 2023 03:49:52 +0000 (22:49 -0500)]
Merge pull request #14646 from masterleinad/restrict_p4est_tests
Daniel Arndt [Fri, 6 Jan 2023 18:41:24 +0000 (18:41 +0000)]
Restrict some tests requiring p4est
Daniel Arndt [Fri, 6 Jan 2023 18:29:54 +0000 (13:29 -0500)]
Address review comments
Peter Munch [Thu, 5 Jan 2023 22:42:12 +0000 (23:42 +0100)]
Merge pull request #14645 from lethe-cfd/add_metis_to_docker_image
Add METIS to Docker image
Bruno Blais [Thu, 5 Jan 2023 22:07:57 +0000 (17:07 -0500)]
Add METIS to Docker image
Jean-Paul Pelteret [Thu, 5 Jan 2023 20:07:55 +0000 (21:07 +0100)]
Merge pull request #14643 from Rombur/adolc
Fix issue when adol-c is enabled
Bruno Turcksin [Thu, 5 Jan 2023 16:59:39 +0000 (11:59 -0500)]
Fix issue when adol-c is enabled
Jean-Paul Pelteret [Thu, 5 Jan 2023 07:35:17 +0000 (08:35 +0100)]
Merge pull request #14640 from tamiko/cmake_fix_kokkos_header_installation
CMake: fix kokkos header installation
Matthias Maier [Wed, 4 Jan 2023 21:34:29 +0000 (15:34 -0600)]
Merge pull request #14638 from masterleinad/explicit_docker
Be explicit about enabled and disabled dependencies in the Docker image
Daniel Arndt [Wed, 4 Jan 2023 20:53:16 +0000 (21:53 +0100)]
Merge pull request #14639 from masterleinad/require_trilinos_12_14_1
Fixes https://github.com/dealii/dealii/issues/14637
Matthias Maier [Wed, 4 Jan 2023 18:41:19 +0000 (12:41 -0600)]
CMake: fix kokkos header installation
Daniel Arndt [Wed, 4 Jan 2023 14:19:08 +0000 (15:19 +0100)]
Be explicit about enabled and disabled dependencies in the Docker image
Daniel Arndt [Wed, 4 Jan 2023 16:31:22 +0000 (17:31 +0100)]
Drop the requirement for Trilinos+Kokkos rom 13.2 to 12.14.1
Daniel Arndt [Wed, 4 Jan 2023 11:20:51 +0000 (12:20 +0100)]
Always allow accessing data in ArrayView
Daniel Arndt [Wed, 4 Jan 2023 10:31:52 +0000 (11:31 +0100)]
Merge pull request #14636 from tjhei/jenkins-disable-old
Daniel Arndt [Wed, 4 Jan 2023 10:31:19 +0000 (11:31 +0100)]
Merge pull request #14635 from tamiko/silence_warning
Timo Heister [Tue, 3 Jan 2023 21:04:38 +0000 (16:04 -0500)]
Merge pull request #14634 from tamiko/fix_configuration
CMake: Do not set errand DEAL_II_TRILINOS_WITH* if Trilinos gets disabled
Timo Heister [Tue, 3 Jan 2023 19:00:59 +0000 (14:00 -0500)]
Jenkins: delete mark job as well, as it is not needed anymore
This is because invidual jobs report there status without having to
be on a node yet.
Timo Heister [Tue, 3 Jan 2023 18:55:35 +0000 (13:55 -0500)]
delete old Jenkins setup
Matthias Maier [Tue, 3 Jan 2023 17:48:49 +0000 (11:48 -0600)]
CMake: Silence bogus Boost warning
Silence the following noisy warning:
```
CMake Warning at /usr/share/cmake/Modules/FindBoost.cmake:1384 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake/Modules/FindBoost.cmake:1507 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake/Modules/FindBoost.cmake:2118 (_Boost_MISSING_DEPENDENCIES)
cmake/modules/FindDEAL_II_BOOST.cmake:57 (find_package)
cmake/configure/configure_20_boost.cmake:36 (find_package)
/scratch/users/testsuite/build-3O4p1Svw/CMakeFiles/CMakeTmp/evaluate_expression.tmp:1 (feature_BOOST_find_external)
cmake/macros/macro_evaluate_expression.cmake:30 (include)
cmake/macros/macro_configure_feature.cmake:239 (evaluate_expression)
cmake/configure/configure_20_boost.cmake:170 (configure_feature)
cmake/macros/macro_verbose_include.cmake:19 (include)
CMakeLists.txt:130 (verbose_include)
```
Matthias Maier [Tue, 3 Jan 2023 17:22:09 +0000 (11:22 -0600)]
CMake: propagate Trilinos configuration into DEAL_II_ namespace
Matthias Maier [Tue, 3 Jan 2023 17:11:04 +0000 (11:11 -0600)]
CMake: do not pollute DEAL_II_* namespace while searching for Trilinos
Daniel Arndt [Tue, 3 Jan 2023 12:24:58 +0000 (13:24 +0100)]
Merge pull request #14629 from jppelteret/trilinos_nox_01
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