]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
23 months agoMerge pull request #14552 from peterrum/cgs_log
David Wells [Fri, 9 Dec 2022 17:20:32 +0000 (12:20 -0500)]
Merge pull request #14552 from peterrum/cgs_log

Modified Gram-Schmidt: add docu

23 months agoMerge pull request #14550 from tamiko/fix_gmsh_configure
David Wells [Fri, 9 Dec 2022 17:05:16 +0000 (12:05 -0500)]
Merge pull request #14550 from tamiko/fix_gmsh_configure

CMake: Bugfix: only export DEAL_II_GMSH_WITH_API if gmsh is configured

23 months agoTry using mold in github actions 14520/head
Daniel Arndt [Fri, 9 Dec 2022 17:02:24 +0000 (12:02 -0500)]
Try using mold in github actions

23 months agoModified Gram-Schmidt: add docu 14552/head
Peter Munch [Thu, 8 Dec 2022 18:16:23 +0000 (19:16 +0100)]
Modified Gram-Schmidt: add docu

23 months agoMerge pull request #14546 from drwells/step-70-no-boost
Matthias Maier [Fri, 9 Dec 2022 00:09:47 +0000 (18:09 -0600)]
Merge pull request #14546 from drwells/step-70-no-boost

step-70: remove a dependency on boost.

23 months agoFix clang-tidy
Daniel Arndt [Thu, 8 Dec 2022 18:17:36 +0000 (13:17 -0500)]
Fix clang-tidy

23 months agoAdd some missing instantiations
Daniel Arndt [Thu, 8 Dec 2022 17:39:21 +0000 (12:39 -0500)]
Add some missing instantiations

23 months agoBackport for Kokkos 3.0
Daniel Arndt [Thu, 8 Dec 2022 14:17:51 +0000 (09:17 -0500)]
Backport for Kokkos 3.0

23 months agobackport to Kokkos 3.4.00
Daniel Arndt [Wed, 7 Dec 2022 23:45:30 +0000 (18:45 -0500)]
backport to Kokkos 3.4.00

23 months agoRevert changing due to boost
Daniel Arndt [Wed, 7 Dec 2022 22:15:41 +0000 (22:15 +0000)]
Revert changing due to boost

23 months agoIndentation
Daniel Arndt [Wed, 7 Dec 2022 22:12:47 +0000 (22:12 +0000)]
Indentation

23 months agoFix tests
Daniel Arndt [Wed, 7 Dec 2022 22:07:47 +0000 (22:07 +0000)]
Fix tests

23 months agoRemove duplicated tests
Daniel Arndt [Wed, 7 Dec 2022 21:06:49 +0000 (21:06 +0000)]
Remove duplicated tests

23 months agoTests passing
Daniel Arndt [Wed, 7 Dec 2022 21:06:28 +0000 (21:06 +0000)]
Tests passing

23 months agoTests compiling an mostly working
Daniel Arndt [Wed, 7 Dec 2022 20:04:54 +0000 (20:04 +0000)]
Tests compiling an mostly working

23 months agoRevert changes to grid_tools.cc
Daniel Arndt [Tue, 6 Dec 2022 19:37:49 +0000 (14:37 -0500)]
Revert changes to grid_tools.cc

23 months agoFix up
Daniel Arndt [Tue, 6 Dec 2022 16:23:54 +0000 (11:23 -0500)]
Fix up

23 months agoConvert distributed::Vector to Kokkos
Daniel Arndt [Tue, 6 Dec 2022 14:21:50 +0000 (14:21 +0000)]
Convert distributed::Vector to Kokkos

23 months agoAdd test
Daniel Arndt [Mon, 5 Dec 2022 00:15:09 +0000 (19:15 -0500)]
Add test

23 months agoImprove Kokkos initialization
Daniel Arndt [Sun, 4 Dec 2022 19:30:17 +0000 (14:30 -0500)]
Improve Kokkos initialization

23 months agoGuard CUDA instantiations
Daniel Arndt [Fri, 2 Dec 2022 16:42:07 +0000 (11:42 -0500)]
Guard CUDA instantiations

23 months agoDon't use std::is_same_v yet
Daniel Arndt [Fri, 2 Dec 2022 16:41:48 +0000 (11:41 -0500)]
Don't use std::is_same_v yet

23 months agoDisable warnings for Kokkos_Core.hpp
Daniel Arndt [Thu, 1 Dec 2022 13:37:00 +0000 (08:37 -0500)]
Disable warnings for Kokkos_Core.hpp

23 months agoSmall fixes
Daniel Arndt [Thu, 1 Dec 2022 23:08:03 +0000 (18:08 -0500)]
Small fixes

23 months agoIndentation
Daniel Arndt [Thu, 1 Dec 2022 23:03:49 +0000 (18:03 -0500)]
Indentation

23 months agoUse original memory_space_data design
Daniel Arndt [Thu, 1 Dec 2022 22:57:21 +0000 (22:57 +0000)]
Use original memory_space_data design

23 months agoRemove Policy
Daniel Arndt [Thu, 1 Dec 2022 22:42:01 +0000 (22:42 +0000)]
Remove Policy

23 months agoRename values_dev -> values
Daniel Arndt [Thu, 1 Dec 2022 22:31:04 +0000 (22:31 +0000)]
Rename values_dev -> values

23 months agoRename variables
Daniel Arndt [Thu, 1 Dec 2022 22:15:38 +0000 (22:15 +0000)]
Rename variables

23 months agoworking
Daniel Arndt [Thu, 1 Dec 2022 20:16:27 +0000 (20:16 +0000)]
working

23 months agoworking
Daniel Arndt [Thu, 1 Dec 2022 20:14:40 +0000 (20:14 +0000)]
working

23 months agoFixes
Daniel Arndt [Wed, 30 Nov 2022 20:40:06 +0000 (20:40 +0000)]
Fixes

23 months agoFix CMakeLists.txt
Daniel Arndt [Wed, 30 Nov 2022 16:37:24 +0000 (16:37 +0000)]
Fix CMakeLists.txt

23 months agoUpdate memory_space
Daniel Arndt [Wed, 30 Nov 2022 16:36:29 +0000 (16:36 +0000)]
Update memory_space

23 months agoAdd files for making sure Kokkos is initialized
Daniel Arndt [Wed, 30 Nov 2022 16:32:44 +0000 (16:32 +0000)]
Add files for making sure Kokkos is initialized

23 months agoMerge pull request #14543 from masterleinad/fix_undefned_var_template
Wolfgang Bangerth [Thu, 8 Dec 2022 21:39:25 +0000 (14:39 -0700)]
Merge pull request #14543 from masterleinad/fix_undefned_var_template

Address Wundefined-var-template

23 months agoRotate for dim=1 spacedim=2 14321/head
Peter Munch [Wed, 28 Sep 2022 13:45:47 +0000 (15:45 +0200)]
Rotate for dim=1 spacedim=2

23 months agoMerge pull request #14417 from peterrum/cheby_forth_kind
Peter Munch [Thu, 8 Dec 2022 21:02:19 +0000 (22:02 +0100)]
Merge pull request #14417 from peterrum/cheby_forth_kind

Introduce 4th-kind Chebyshev preconditioner

23 months agoMerge pull request #14548 from masterleinad/fix_indent_jenkins
Timo Heister [Thu, 8 Dec 2022 20:58:52 +0000 (15:58 -0500)]
Merge pull request #14548 from masterleinad/fix_indent_jenkins

Fix indentation in Jenkinsfile.mpi

23 months agoFEEvaluation: precompile for n_q_points==2*fe_degree 14387/head
Peter Munch [Wed, 2 Nov 2022 19:26:52 +0000 (20:26 +0100)]
FEEvaluation: precompile for n_q_points==2*fe_degree

23 months agoCMake: Bugfix: only export DEAL_II_GMSH_WITH_API if gmsh is configured 14550/head
Matthias Maier [Thu, 8 Dec 2022 01:25:46 +0000 (19:25 -0600)]
CMake: Bugfix: only export DEAL_II_GMSH_WITH_API if gmsh is configured

If the gmsh library is installed but the gmsh executable is missing we
currently disable gmsh support. This implies that we will not link
against the gmsh library.

Unfortunately, on first configure pass the variable `GMSH_WITH_API` is
still populated with a `TRUE` value and the `DEAL_II_GMSH_WITH_API`
variable gets set by accident and final linkage fails.

This issue is hard to spot because a second invocation of cmake will
cure the configure mistake (and the debian/ubuntu packages do not run
any autodetection).

23 months agoFix indentation in Jenkinsfile.mpi 14548/head
Daniel Arndt [Thu, 8 Dec 2022 15:56:43 +0000 (10:56 -0500)]
Fix indentation in Jenkinsfile.mpi

23 months agoMerge pull request #14542 from tjhei/jenkins-mpi
Daniel Arndt [Thu, 8 Dec 2022 15:49:58 +0000 (10:49 -0500)]
Merge pull request #14542 from tjhei/jenkins-mpi

23 months agoIntroduce 4th-kind Chebyshev preconditioner 14417/head
Peter Munch [Sat, 29 Oct 2022 11:27:27 +0000 (13:27 +0200)]
Introduce 4th-kind Chebyshev preconditioner

23 months agostep-70: remove a dependency on boost. 14546/head
David Wells [Thu, 8 Dec 2022 15:09:03 +0000 (10:09 -0500)]
step-70: remove a dependency on boost.

23 months agoindent 14542/head
Timo Heister [Thu, 8 Dec 2022 00:14:05 +0000 (19:14 -0500)]
indent

23 months agoMerge pull request #14541 from masterleinad/fix_deprecations
David Wells [Wed, 7 Dec 2022 23:29:14 +0000 (18:29 -0500)]
Merge pull request #14541 from masterleinad/fix_deprecations

Fix some deprecations

23 months agoAddress Wundefined-var-template 14543/head
Daniel Arndt [Wed, 7 Dec 2022 21:30:20 +0000 (16:30 -0500)]
Address Wundefined-var-template

23 months ago[CI] add new MPI Jenkinsfile
Timo Heister [Tue, 6 Dec 2022 19:41:55 +0000 (14:41 -0500)]
[CI] add new MPI Jenkinsfile

This enables a new Jenkins project on a new server,
https://ci.tjhei.info to run the tests with MPI enabled.

a

23 months agoFix some deprecations 14541/head
Daniel Arndt [Wed, 7 Dec 2022 15:57:44 +0000 (15:57 +0000)]
Fix some deprecations

23 months agoMerge pull request #14540 from tamiko/use_pthread_flag
Timo Heister [Wed, 7 Dec 2022 12:54:12 +0000 (07:54 -0500)]
Merge pull request #14540 from tamiko/use_pthread_flag

CMake: Ensure we use "-pthread" instead of "-lpthread" for thread support

23 months agoCMake: Ensure we use "-pthread" instead of "-lpthread" for thread support 14540/head
Matthias Maier [Wed, 7 Dec 2022 00:45:53 +0000 (18:45 -0600)]
CMake: Ensure we use "-pthread" instead of "-lpthread" for thread support

23 months agoMerge pull request #14538 from luca-heltai/changelog-zampini
David Wells [Wed, 7 Dec 2022 02:36:10 +0000 (21:36 -0500)]
Merge pull request #14538 from luca-heltai/changelog-zampini

Added changelog for #14531

23 months agoAdded changelog. 14538/head
Luca Heltai [Tue, 6 Dec 2022 18:19:59 +0000 (19:19 +0100)]
Added changelog.

23 months agoMerge pull request #14535 from mschreter/mca_1d_remove_saddle_point
Peter Munch [Tue, 6 Dec 2022 19:55:01 +0000 (20:55 +0100)]
Merge pull request #14535 from mschreter/mca_1d_remove_saddle_point

MarchingCubeAlgorithm<1>: Remove determination of a saddle point

23 months agoMerge pull request #14531 from tjhei/step-77-fix
Daniel Arndt [Tue, 6 Dec 2022 19:26:52 +0000 (14:26 -0500)]
Merge pull request #14531 from tjhei/step-77-fix

23 months agoMerge pull request #14528 from tamiko/cmake_cleanup_3
Daniel Arndt [Tue, 6 Dec 2022 14:06:00 +0000 (09:06 -0500)]
Merge pull request #14528 from tamiko/cmake_cleanup_3

23 months agoMerge pull request #14533 from vovannikov/solver_control_history
Timo Heister [Mon, 5 Dec 2022 22:59:12 +0000 (17:59 -0500)]
Merge pull request #14533 from vovannikov/solver_control_history

Solver control history

23 months agoChoose to initialize ghost elements with reinit(partitioner). 14536/head
Marc Fehling [Fri, 2 Dec 2022 21:11:20 +0000 (14:11 -0700)]
Choose to initialize ghost elements with reinit(partitioner).

23 months agoremove saddle point 14535/head
Magdalena Schreter [Mon, 5 Dec 2022 21:24:39 +0000 (22:24 +0100)]
remove saddle point

23 months agoMerge pull request #14534 from masterleinad/clang_no_trivial_copy
Daniel Arndt [Mon, 5 Dec 2022 22:02:10 +0000 (17:02 -0500)]
Merge pull request #14534 from masterleinad/clang_no_trivial_copy

23 months agoDon't use __has_trivial_copy 14534/head
Daniel Arndt [Mon, 5 Dec 2022 19:29:10 +0000 (14:29 -0500)]
Don't use __has_trivial_copy

23 months agoAdd change-log entry 14533/head
Vladimir Ivannikov [Mon, 5 Dec 2022 15:08:02 +0000 (16:08 +0100)]
Add change-log entry

23 months agoUpdate test
Vladimir Ivannikov [Mon, 5 Dec 2022 10:20:44 +0000 (11:20 +0100)]
Update test

23 months agoClear history for a new step
Vladimir Ivannikov [Mon, 5 Dec 2022 10:20:26 +0000 (11:20 +0100)]
Clear history for a new step

23 months agoMerge pull request #14532 from bangerth/50
Timo Heister [Mon, 5 Dec 2022 01:05:28 +0000 (20:05 -0500)]
Merge pull request #14532 from bangerth/50

Remove a 'using' declaration in step-50 that is in the way.

23 months agoupdate test results 14531/head
Timo Heister [Mon, 5 Dec 2022 00:40:27 +0000 (00:40 +0000)]
update test results

23 months agoRemove a 'using' declaration in step-50 that is in the way. 14532/head
Wolfgang Bangerth [Sat, 3 Dec 2022 20:34:15 +0000 (13:34 -0700)]
Remove a 'using' declaration in step-50 that is in the way.

23 months agoMerge pull request #14524 from bangerth/d2
Timo Heister [Sun, 4 Dec 2022 14:46:48 +0000 (09:46 -0500)]
Merge pull request #14524 from bangerth/d2

Avoid using dealii:: qualified names.

23 months agoMerge pull request #14529 from drwells/step-70-include
Matthias Maier [Sat, 3 Dec 2022 23:07:05 +0000 (17:07 -0600)]
Merge pull request #14529 from drwells/step-70-include

Fix compilation of step-70.

23 months agoAvoid using dealii:: qualified names. 14524/head
Wolfgang Bangerth [Fri, 2 Dec 2022 22:52:48 +0000 (15:52 -0700)]
Avoid using dealii:: qualified names.

23 months agoalso fix test
Timo Heister [Sat, 3 Dec 2022 14:07:52 +0000 (09:07 -0500)]
also fix test

23 months agoSTEP-77: fix bug
Stefano Zampini [Sat, 26 Nov 2022 18:42:31 +0000 (21:42 +0300)]
STEP-77: fix bug

23 months agoFix compilation of step-70. 14529/head
David Wells [Sat, 3 Dec 2022 13:49:47 +0000 (08:49 -0500)]
Fix compilation of step-70.

I'm not sure how this ever worked.

23 months agoMerge pull request #14522 from bangerth/12b
Matthias Maier [Sat, 3 Dec 2022 08:13:58 +0000 (02:13 -0600)]
Merge pull request #14522 from bangerth/12b

Reference the correct step.

23 months agoMerge pull request #14523 from bangerth/12b-2
Matthias Maier [Sat, 3 Dec 2022 08:13:39 +0000 (02:13 -0600)]
Merge pull request #14523 from bangerth/12b-2

Just do 'using namespace dealii' in main().

23 months agoMerge pull request #14526 from bangerth/12b-3
Matthias Maier [Sat, 3 Dec 2022 08:12:38 +0000 (02:12 -0600)]
Merge pull request #14526 from bangerth/12b-3

List step 12b in the list of tutorials.

23 months agoMerge pull request #14527 from bangerth/resources
Matthias Maier [Sat, 3 Dec 2022 08:12:19 +0000 (02:12 -0600)]
Merge pull request #14527 from bangerth/resources

Add to the resources for programmers mentioned in step-1.

23 months agoadd a news/changes entry 14528/head
Matthias Maier [Sat, 3 Dec 2022 04:28:46 +0000 (22:28 -0600)]
add a news/changes entry

23 months agoCMake: remove switch_library_preference()
Matthias Maier [Sat, 3 Dec 2022 04:26:54 +0000 (22:26 -0600)]
CMake: remove switch_library_preference()

23 months agoCMake: remove DEAL_II_PREFER_STATIC_LINKAGE
Matthias Maier [Sat, 3 Dec 2022 04:14:16 +0000 (22:14 -0600)]
CMake: remove DEAL_II_PREFER_STATIC_LINKAGE

23 months agoCMake: Remove DEAL_II_STATIC_EXECUTABLE configure option
Matthias Maier [Sat, 3 Dec 2022 04:11:13 +0000 (22:11 -0600)]
CMake: Remove DEAL_II_STATIC_EXECUTABLE configure option

23 months agoCMake: remove DEAL_II_SETUP_DEFAULT_COMPILER_FLAGS configure option
Matthias Maier [Sat, 3 Dec 2022 04:04:05 +0000 (22:04 -0600)]
CMake: remove DEAL_II_SETUP_DEFAULT_COMPILER_FLAGS configure option

23 months agoAdd to the resources for programmers mentioned in step-1. 14527/head
Wolfgang Bangerth [Sat, 3 Dec 2022 03:40:52 +0000 (20:40 -0700)]
Add to the resources for programmers mentioned in step-1.

23 months agoMerge pull request #14521 from masterleinad/fix_test_warnings
Wolfgang Bangerth [Sat, 3 Dec 2022 00:15:57 +0000 (17:15 -0700)]
Merge pull request #14521 from masterleinad/fix_test_warnings

Fix some warnings in tests

23 months agoList step 12b in the list of tutorials. 14526/head
Wolfgang Bangerth [Fri, 2 Dec 2022 22:57:09 +0000 (15:57 -0700)]
List step 12b in the list of tutorials.

23 months agoJust do 'using namespace dealii' in main(). 14523/head
Wolfgang Bangerth [Fri, 2 Dec 2022 22:49:12 +0000 (15:49 -0700)]
Just do 'using namespace dealii' in main().

23 months agoReference the correct step. 14522/head
Wolfgang Bangerth [Fri, 2 Dec 2022 22:25:09 +0000 (15:25 -0700)]
Reference the correct step.

23 months agoFix some warnings in tests 14521/head
Daniel Arndt [Fri, 2 Dec 2022 21:57:25 +0000 (16:57 -0500)]
Fix some warnings in tests

23 months agoAdd support for the mold linker
Daniel Arndt [Fri, 2 Dec 2022 19:33:38 +0000 (14:33 -0500)]
Add support for the mold linker

23 months agoMerge pull request #14519 from tjhei/invalid_int_assignment
Daniel Arndt [Fri, 2 Dec 2022 17:40:22 +0000 (12:40 -0500)]
Merge pull request #14519 from tjhei/invalid_int_assignment

23 months agofix warning: -1 assignment to unsigned 14519/head
Timo Heister [Fri, 2 Dec 2022 14:58:43 +0000 (09:58 -0500)]
fix warning: -1 assignment to unsigned

23 months agoMerge pull request #14504 from bangerth/vtu-6
Luca Heltai [Fri, 2 Dec 2022 08:34:17 +0000 (09:34 +0100)]
Merge pull request #14504 from bangerth/vtu-6

Run the different parts of creating VTU output in parallel.

23 months agoMerge pull request #14513 from luzpaz/equality-to-none
Marc Fehling [Thu, 1 Dec 2022 23:43:20 +0000 (00:43 +0100)]
Merge pull request #14513 from luzpaz/equality-to-none

Fix 'testing equality to None' python issue

23 months agoMerge pull request #14514 from tamiko/fix_github_actions_2
Daniel Arndt [Thu, 1 Dec 2022 21:33:22 +0000 (16:33 -0500)]
Merge pull request #14514 from tamiko/fix_github_actions_2

23 months agoMerge pull request #14515 from tamiko/master
Daniel Arndt [Thu, 1 Dec 2022 20:52:25 +0000 (15:52 -0500)]
Merge pull request #14515 from tamiko/master

23 months agoMerge pull request #14516 from vyushut/step-85
Marc Fehling [Thu, 1 Dec 2022 19:12:11 +0000 (20:12 +0100)]
Merge pull request #14516 from vyushut/step-85

step-85: add namespace to documentation

23 months agoMerge pull request #14506 from tamiko/cmake_cleanup_1
Matthias Maier [Thu, 1 Dec 2022 17:24:28 +0000 (11:24 -0600)]
Merge pull request #14506 from tamiko/cmake_cleanup_1

CMake: Remove deal.IIFeatureConfig.cmake

23 months agomore fixed environments 14516/head
Vladimir Yushutin [Thu, 1 Dec 2022 16:35:56 +0000 (11:35 -0500)]
more fixed environments
step-85: environment added

23 months agoCMake: Bugfix: only add to the linker line what is needed 14515/head
Matthias Maier [Thu, 1 Dec 2022 16:46:01 +0000 (10:46 -0600)]
CMake: Bugfix: only add to the linker line what is needed

The `INTERFACE_LINK_LIBRARIES` option of the Kokkos target might contain
much more than we actually need. So restrict the fixup to finding the
missing linker flag and adding this one.

This works around an issue with the regression tester where the link
interface of the Kokkos::kokkos target contains entries that make the
final link fail.


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