From 29a0828eaae9ffbe93cbcd3b2bb1163b66253aa9 Mon Sep 17 00:00:00 2001 From: Matthias Maier Date: Thu, 6 Jul 2023 22:57:34 -0500 Subject: [PATCH] documentation: use https:// instead of http:// --- doc/doxygen/DoxygenLayout.xml | 2 +- doc/doxygen/code-gallery/code-gallery.h.in | 2 +- doc/doxygen/code-gallery/no-code-gallery.h | 2 +- doc/doxygen/headers/c++.h | 4 +-- doc/doxygen/headers/coding_conventions.h | 2 +- doc/doxygen/headers/distributed.h | 4 +-- doc/doxygen/headers/exceptions.h | 2 +- doc/doxygen/headers/geodynamics.h | 2 +- doc/doxygen/headers/glossary.h | 10 +++---- doc/doxygen/headers/main.h | 2 +- doc/doxygen/headers/multithreading.h | 2 +- doc/doxygen/headers/reordering.h | 2 +- doc/doxygen/references.bib | 34 +++++++++++----------- doc/doxygen/scripts/filter.pl | 10 +++---- doc/doxygen/scripts/mod_footer.pl.in | 4 +-- doc/doxygen/scripts/validate-xrefs.pl | 8 ++--- 16 files changed, 46 insertions(+), 46 deletions(-) diff --git a/doc/doxygen/DoxygenLayout.xml b/doc/doxygen/DoxygenLayout.xml index c2ba417a1f..715472d84d 100644 --- a/doc/doxygen/DoxygenLayout.xml +++ b/doc/doxygen/DoxygenLayout.xml @@ -22,7 +22,7 @@ - + diff --git a/doc/doxygen/code-gallery/code-gallery.h.in b/doc/doxygen/code-gallery/code-gallery.h.in index 92aeef4564..15e580062d 100644 --- a/doc/doxygen/code-gallery/code-gallery.h.in +++ b/doc/doxygen/code-gallery/code-gallery.h.in @@ -24,7 +24,7 @@ * implemented with deal.II, but without the requirement to have these code * documented at the same, extensive level as used in the tutorial. * Instructions for obtaining the code gallery programs can be found at - * http://dealii.org/code-gallery.html . + * https://dealii.org/code-gallery.html . * * @warning The programs that form part of the code gallery are contributed by * others and are not part of deal.II itself. The deal.II authors make diff --git a/doc/doxygen/code-gallery/no-code-gallery.h b/doc/doxygen/code-gallery/no-code-gallery.h index 730a89ebc3..30e9d9ec86 100644 --- a/doc/doxygen/code-gallery/no-code-gallery.h +++ b/doc/doxygen/code-gallery/no-code-gallery.h @@ -23,5 +23,5 @@ * such copy was found when configuring your version of deal.II. * * Instructions for obtaining the code gallery can be found at - * http://dealii.org/code-gallery.html . + * https://dealii.org/code-gallery.html . */ diff --git a/doc/doxygen/headers/c++.h b/doc/doxygen/headers/c++.h index 3675eb2e69..5f28776f7d 100644 --- a/doc/doxygen/headers/c++.h +++ b/doc/doxygen/headers/c++.h @@ -18,12 +18,12 @@ * @defgroup CPP11 deal.II and Modern C++ standards * * Since version 9.6, deal.II requires a compiler that supports at least - * C++17. Large parts + * C++17. Large parts * of the library now depend on modern language constructs which are * documented here. * * One example is support for C++11 - * range-based + * range-based * for loops. deal.II-based codes often have many loops of the kind * @code * Triangulation triangulation; diff --git a/doc/doxygen/headers/coding_conventions.h b/doc/doxygen/headers/coding_conventions.h index c283f0538a..6dde01655c 100644 --- a/doc/doxygen/headers/coding_conventions.h +++ b/doc/doxygen/headers/coding_conventions.h @@ -155,7 +155,7 @@ See deal.II's wiki on github: camel + camel case — while functions and variables use lowercase letters and underscores to separate words. The only exception are the iterator alias in Triangulation diff --git a/doc/doxygen/headers/distributed.h b/doc/doxygen/headers/distributed.h index 6e03c4d45a..21060e33d1 100644 --- a/doc/doxygen/headers/distributed.h +++ b/doc/doxygen/headers/distributed.h @@ -134,7 +134,7 @@ * areas, disregarding the blue areas. * * @note The decomposition of this "real" mesh into the pieces stored - * by each processes is provided by the p4est + * by each processes is provided by the p4est * library. p4est stores the complete mesh in a distributed data structure * called a parallel forest (thus the name). A parallel forest consists of * quad-trees (in 2d) or oct-trees (in 3d) originating in each @@ -157,7 +157,7 @@ * proven that each subdomain consists of at most two disconnected * pieces; see C. Burstedde, J. Holke, T. Isaac: "Bounds on the number of * discontinuities of Morton-type space-filling curves", - * arXiv 1505.05055, + * arXiv 1505.05055, * 2017.) * * diff --git a/doc/doxygen/headers/exceptions.h b/doc/doxygen/headers/exceptions.h index 2bf99686d9..5ce2dc90a4 100644 --- a/doc/doxygen/headers/exceptions.h +++ b/doc/doxygen/headers/exceptions.h @@ -250,7 +250,7 @@ * happened: exceptions that can be triggered by throw statements * and captured by catch clauses, see for example * https://en.wikipedia.org/wiki/C%2B%2B#Exception_handling and - * http://www.cplusplus.com/doc/tutorial/exceptions/ . + * https://www.cplusplus.com/doc/tutorial/exceptions/ . * * At some fundamental level, a typical C++ exception is an object that * is placed in some special place, and then the function exits the current diff --git a/doc/doxygen/headers/geodynamics.h b/doc/doxygen/headers/geodynamics.h index 4458164b53..95f9003895 100644 --- a/doc/doxygen/headers/geodynamics.h +++ b/doc/doxygen/headers/geodynamics.h @@ -42,7 +42,7 @@ Some of these programs were developed under contract from the California Institute of Technology with support by the National Science Foundation under Award No. EAR-0426271, the first of the grants that funded the Computational Infrastructure in +href="https://www.geodynamics.org">Computational Infrastructure in Geodynamics initiative. The recipient, Wolfgang Bangerth, gratefully acknowledges this source of support. diff --git a/doc/doxygen/headers/glossary.h b/doc/doxygen/headers/glossary.h index 8fcb50fcea..38055023af 100644 --- a/doc/doxygen/headers/glossary.h +++ b/doc/doxygen/headers/glossary.h @@ -959,7 +959,7 @@ * * For massively %parallel * computations, deal.II builds on the - * p4est + * p4est * library. If you use this functionality, please also cite the * p4est paper listed at their website. * @@ -1212,7 +1212,7 @@ pages = {4/1--4/31} } * @endcode - * It is available from http://www.math.colostate.edu/~bangerth/publications.html, also see deal.II publications for details. + * It is available from https://www.math.colostate.edu/~bangerth/publications.html, also see deal.II publications for details. * * The numerical examples shown in that paper are generated with a slightly * modified version of step-27. The main difference to that @@ -1592,7 +1592,7 @@ publisher={SIAM}} * @endcode * See - * DOI:10.1137/090778523 + * DOI:10.1137/090778523 * for the paper and deal.II publications for more details. * * @@ -1871,7 +1871,7 @@ * * deal.II implements serialization facilities by implementing the necessary * interfaces for the BOOST serialization library. See there for examples on * how to save and restore objects. * @@ -2258,7 +2258,7 @@ year = 2016 } * @endcode - * It is available from http://www.math.colostate.edu/~bangerth/publications.html, also see deal.II publications for details. + * It is available from https://www.math.colostate.edu/~bangerth/publications.html, also see deal.II publications for details. * * * diff --git a/doc/doxygen/headers/main.h b/doc/doxygen/headers/main.h index c1ad126ba0..ad8579c6c9 100644 --- a/doc/doxygen/headers/main.h +++ b/doc/doxygen/headers/main.h @@ -299,7 +299,7 @@ * to use the tag file, you have to download it into a place where Doxygen can find it. * After that, find the key TAGFILES in your Doxygen options file and write something like * 
- * TAGFILES = deal.tag=http://www.dealii.org/X.Y.Z/doxygen/deal.II
+ * TAGFILES = deal.tag=https://www.dealii.org/X.Y.Z/doxygen/deal.II
  *
* where X.Y.Z refers to the release you want to link to. Be sure you use * the matching tag file. In theory, you can also link against the developing revisions diff --git a/doc/doxygen/headers/multithreading.h b/doc/doxygen/headers/multithreading.h index e560531cfa..90e22cdff5 100644 --- a/doc/doxygen/headers/multithreading.h +++ b/doc/doxygen/headers/multithreading.h @@ -151,7 +151,7 @@ * vein, it often pays off to use tasks, rather than threads, in a program. * * deal.II does not implement scheduling tasks to threads itself. For this, we - * use the Threading Building + * use the Threading Building * Blocks (TBB) library for which we provide simple wrappers. TBB * abstracts the details of how to start or stop threads, start tasks on * individual threads, etc, and provides interfaces that are portable across diff --git a/doc/doxygen/headers/reordering.h b/doc/doxygen/headers/reordering.h index 29a68851ca..ae376a2c15 100644 --- a/doc/doxygen/headers/reordering.h +++ b/doc/doxygen/headers/reordering.h @@ -455,7 +455,7 @@ * unstructured two- and three-dimensional meshes", R. Agelek, * M. Anderson, W. Bangerth, W. L. Barth, ACM Transactions on * Mathematical Software, vol. 44, article 5, 2017. A preprint is - * available as arxiv + * available as arxiv * 1512.02137. * * diff --git a/doc/doxygen/references.bib b/doc/doxygen/references.bib index 85cb424cc7..286b2e2594 100644 --- a/doc/doxygen/references.bib +++ b/doc/doxygen/references.bib @@ -294,7 +294,7 @@ issue = { 1 }, pages = { 191--211 }, doi = {10.1137/20M1342902}, - url = {http://doi.org/10.1137/20M1342902}, + url = {https://doi.org/10.1137/20M1342902}, } @@ -649,7 +649,7 @@ issue = { 6 }, pages = { 2095--2113 }, doi = {10.1137/050646421}, - url = {http://doi.org/10.1137/050646421}, + url = {https://doi.org/10.1137/050646421}, } @article{HeisterRapin2013, @@ -661,7 +661,7 @@ issue = { 1 }, pages = { 118--134 }, doi = {10.1002/fld.3654}, - url = {http://doi.org/10.1002/fld.3654}, + url = {https://doi.org/10.1002/fld.3654}, } @article{Ghia1982, @@ -673,7 +673,7 @@ issue = { 3 }, pages = { 387--411 }, doi = {10.1016/0021-9991(82)90058-4}, - url = {http://doi.org/10.1016/0021-9991(82)90058-4}, + url = {https://doi.org/10.1016/0021-9991(82)90058-4}, } @article{Erturk2005, @@ -685,7 +685,7 @@ issue = { 7 }, pages = { 747--774 }, doi = {10.1002/fld.953}, - url = {http://doi.org/10.1002/fld.953}, + url = {https://doi.org/10.1002/fld.953}, } @article{Yang1998, @@ -697,7 +697,7 @@ issue = { 1 }, pages = { 464--487 }, doi = {10.1006/jcph.1998.6062}, - url = {http://doi.org/10.1006/jcph.1998.6062}, + url = {https://doi.org/10.1006/jcph.1998.6062}, } @article{Bruneau2006, @@ -709,7 +709,7 @@ issue = { 3 }, pages = { 326--348 }, doi = {10.1016/j.compfluid.2004.12.004}, - url = {http://doi.org/10.1016/j.compfluid.2004.12.004}, + url = {https://doi.org/10.1016/j.compfluid.2004.12.004}, } @@ -726,7 +726,7 @@ issue = { 2 }, pages = { 228--238 }, doi = {10.1145/1067967.1067970}, - url = {http://doi.org/10.1145/1067967.1067970}, + url = {https://doi.org/10.1145/1067967.1067970}, } @article{Day2001, @@ -738,7 +738,7 @@ issue = { 2 }, pages = { 480--498 }, doi = {10.1137/S1064827500372262}, - url = {http://doi.org/10.1137/S1064827500372262}, + url = {https://doi.org/10.1137/S1064827500372262}, } @article{Axelsson2014, @@ -750,7 +750,7 @@ issue = { 4 }, pages = { 811--841 }, doi = {10.1007/s11075-013-9764-1}, - url = {http://doi.org/10.1007/s11075-013-9764-1}, + url = {https://doi.org/10.1007/s11075-013-9764-1}, } @article{Liao2016, @@ -762,7 +762,7 @@ issue = { 9 }, pages = { 2473--2485 }, doi = {10.1016/j.camwa.2016.09.004}, - url = {http://doi.org/10.1016/j.camwa.2016.09.004}, + url = {https://doi.org/10.1016/j.camwa.2016.09.004}, } @@ -1026,7 +1026,7 @@ NUMBER = {5}, PAGES = {A3211--A3239}, DOI = {10.1137/17M1149961}, - URL = {http://doi.org/10.1137/17M1149961} + URL = {https://doi.org/10.1137/17M1149961} } @book {GuermondErn2004, @@ -1652,7 +1652,7 @@ title = {High-{Order} {Quadrature} {Methods} for {Implicitly} {Defined} {Surfaces} and {Volumes} in {Hyperrectangles}}, volume = {37}, issn = {1064-8275, 1095-7197}, - url = {http://epubs.siam.org/doi/10.1137/140966290}, + url = {https://epubs.siam.org/doi/10.1137/140966290}, doi = {10.1137/140966290}, language = {en}, number = {2}, @@ -1668,7 +1668,7 @@ title = {Fictitious domain finite element methods using cut elements: {II}. {A} stabilized {Nitsche} method}, volume = {62}, issn = {01689274}, - url = {http://linkinghub.elsevier.com/retrieve/pii/S0168927411000298}, + url = {https://linkinghub.elsevier.com/retrieve/pii/S0168927411000298}, doi = {10.1016/j.apnum.2011.01.008}, language = {en}, number = {4}, @@ -1684,7 +1684,7 @@ title = {{CutFEM}: {Discretizing} geometry and partial differential equations}, volume = {104}, issn = {00295981}, - url = {http://doi.wiley.com/10.1002/nme.4823}, + url = {https://doi.wiley.com/10.1002/nme.4823}, doi = {10.1002/nme.4823}, language = {en}, number = {7}, @@ -2052,7 +2052,7 @@ school = {Virginia Tech}, year = {1996}, month = jun, - url = {http://hdl.handle.net/10919/9579} + url = {https://hdl.handle.net/10919/9579} } @article{Boffi2012, @@ -2064,7 +2064,7 @@ issue = {2}, pages = {383--400}, doi = {10.1007/s10915-011-9549-4}, - url = {http://doi.org/10.1007/s10915-011-9549-4} + url = {https://doi.org/10.1007/s10915-011-9549-4} } @PhDThesis{Richter2005, diff --git a/doc/doxygen/scripts/filter.pl b/doc/doxygen/scripts/filter.pl index 809be00de6..5937b8e755 100755 --- a/doc/doxygen/scripts/filter.pl +++ b/doc/doxygen/scripts/filter.pl @@ -136,7 +136,7 @@ while (<>) $text = "\@note The material presented here is also discussed in "; # add links to the individual lectures - $text = $text . "video lecture $2"; + $text = $text . "video lecture $2"; if (length($3) > 0) { @@ -147,11 +147,11 @@ while (<>) foreach $lecture (@otherlectures) { - $text = $text . ", video lecture $lecture"; + $text = $text . ", video lecture $lecture"; } } - $text = $text . ". (All video lectures are also available here.)"; + $text = $text . ". (All video lectures are also available here.)"; s/(\@dealiiVideoLecture\{([0-9\.]+)((, *[0-9\.]+ *)*)\})/$text/; } @@ -165,7 +165,7 @@ while (<>) $text = "See also "; # add links to the individual lectures - $text = $text . "video lecture $2"; + $text = $text . "video lecture $2"; if (length($3) > 0) { @@ -175,7 +175,7 @@ while (<>) foreach $lecture (@otherlectures) { - $text = $text . ", video lecture $lecture"; + $text = $text . ", video lecture $lecture"; } } diff --git a/doc/doxygen/scripts/mod_footer.pl.in b/doc/doxygen/scripts/mod_footer.pl.in index b3ddb6beba..54bf69ab13 100644 --- a/doc/doxygen/scripts/mod_footer.pl.in +++ b/doc/doxygen/scripts/mod_footer.pl.in @@ -23,8 +23,8 @@ my $host = hostname; my $hosting = << 'EOT'   Hosting provided by  -IWR -Universität Heidelberg +IWR +Universität Heidelberg EOT ; diff --git a/doc/doxygen/scripts/validate-xrefs.pl b/doc/doxygen/scripts/validate-xrefs.pl index 8ca95a1f8c..13474b62f8 100644 --- a/doc/doxygen/scripts/validate-xrefs.pl +++ b/doc/doxygen/scripts/validate-xrefs.pl @@ -99,8 +99,8 @@ foreach $filename (@ARGV) $external_file = $1; $external_ref = $2; - # if the file name was prepended with http: (but is a local file, - # so no double-slash), then split off http: + # if the file name was prepended with https: (but is a local file, + # so no double-slash), then split off https: $external_file =~ s/^http(s)?://g; print "external reference: $link\n" if $debug; @@ -129,8 +129,8 @@ foreach $filename (@ARGV) # this must now be a regular file which is # referenced. the file must be local - # if the file name was prepended with http: (but is a local file, - # so no double-slash), then split off http: + # if the file name was prepended with https: (but is a local file, + # so no double-slash), then split off https: $link =~ s/^http(s)?://g; die "---Local file `$link' not found in file `$filename'\n This line is: $this_line.\n" -- 2.39.5